ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2824_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 16007..16639

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MatE n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003809C37 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 172.0
  • Bit_score: 232
  • Evalue 3.20e-58
MATE efflux family protein {ECO:0000313|EMBL:EPE97825.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 172.0
  • Bit_score: 224
  • Evalue 1.20e-55
norM; multidrug resistance protein NorM; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 172.0
  • Bit_score: 218
  • Evalue 1.50e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGCGCTTCTGGCGGCCGGACTGGCGCGCCTTCTTCGAGGTGCTGCATCTCGGTTTTCCGATCGGCATGACGCTCTTGGCCGAAGTCAGCCTGTTCACGGCGGCCTCGCTGATGATGGGGCGCATCGGCACGCTGGAGCTTGCCGCCCACGGCATCGCGCTGCAGCTTTCCGGGATCACCTTCATGATTCCGCTGGGGCTGGCGCAGGCGGGCACCGTCATGGTCGGCATGGCGCATGGGCGCGGCGACACCACCGCCATGGTGCGCGCCTCGGTGTCGGTCACCGCCCTCGCCATCATGGTGTCGATGGTCTGCACGGCGATGCTGGCTTCGTTCCCGGCCTATTTTGGAAGCCTGTTCATCAACACGCATACGCCGGATGCGGCCCGGGTTCTGGAAATCGCCGCCTCGTTCATCGTCATTGCCGGCATCTTCCAGCTCGTCGACGGCATGCAGGCGATTGCCAGCGGTTTGCTGCGCGGGCTGAAGGATGCGCGCGTGCCGATGGGGCTGGCGCNNNNNNNNNNNNNNNNNNNNNNGGCATTGGCATCTGGTATGGTTTCCTCGTCGGGCTCGGCACGGCCTCGGCGCTGCTTTGCTGGCGGTATTACCGGCTGCTGCGCAGCCATATGA
PROTEIN sequence
Length: 211
VRFWRPDWRAFFEVLHLGFPIGMTLLAEVSLFTAASLMMGRIGTLELAAHGIALQLSGITFMIPLGLAQAGTVMVGMAHGRGDTTAMVRASVSVTALAIMVSMVCTAMLASFPAYFGSLFINTHTPDAARVLEIAASFIVIAGIFQLVDGMQAIASGLLRGLKDARVPMGLAXXXXXXXXALASGMVSSSGSARPRRCFAGGITGCCAAI*