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SCNpilot_expt_1000_bf_scaffold_2824_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(25561..26388)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESM9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 277.0
  • Bit_score: 375
  • Evalue 5.20e-101
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EYR81044.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 277.0
  • Bit_score: 375
  • Evalue 7.30e-101
araC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 258.0
  • Bit_score: 334
  • Evalue 3.20e-89

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGACAATCGGTATCACATACCTGCCATCGGCCCGGCGTGGCGAGACGCCTCCGCGGCATTTCCTCGAACCGCCATTTCGCAGCGCCCTGCCCTCGCCGCTCTATTTCCGTGTCGCCCATACGCCGGCGGACGCCGCTTATCCGCGCCACAGCCATAGTTGGGGCGAGTTCGTCTATTCCTATAGCGGCGTCATGGAAATCAGCCTTGCCGACCGGCATTACCTGGCGCCGCCGCAATACGGCATCTGGCTGCCGCCCGACATTGAACATCAAGGTCTGAACCGCCACGAAGCCTATCACTGCTCGCTTTATGTCTCGCGCGCGCTCTGCGACCGCCTGCCCGACACGACCTGCGCCCTGACGCTGAGCCCGCTGCTGCGCGCCATGCTCGAACATCTCAGGCAAAAGGAAACGGTCGCAGATCCCTCGGCGGAGCATCAACGTTTCCTGCAGGTGGTGGTCGATCTTTTGACTGAAGCGCCGCGCGTCGGCAGCTACCTGCCCTGGTCCACCGATGCCCATCTCGCCCCGGTTCTGGTGCATCTGCAGGACAATCCAGGCGACAACCGGTCGCTGGCCGAATTCGCGCGCCTGGCCGGGACCACCGAGCGGACGCTCATTCGCCGTTGCCAGGGCGAACTCGGCATGACCTTTTCCGAATGGAAACAACGCATGCGGGTGCTGAAAGCCATGCCGCTGCTTGAGGGCGGCGAGACGGTGGATGCGATCTCGGCGCGGCTGGGTTACGGCAACGCCTCCGCCTTCATCGCCATGTTCAAGCGCATGACCGGCACGACGCCGGACGAATACCGCCGCTCCGCCGCCTGA
PROTEIN sequence
Length: 276
MTIGITYLPSARRGETPPRHFLEPPFRSALPSPLYFRVAHTPADAAYPRHSHSWGEFVYSYSGVMEISLADRHYLAPPQYGIWLPPDIEHQGLNRHEAYHCSLYVSRALCDRLPDTTCALTLSPLLRAMLEHLRQKETVADPSAEHQRFLQVVVDLLTEAPRVGSYLPWSTDAHLAPVLVHLQDNPGDNRSLAEFARLAGTTERTLIRRCQGELGMTFSEWKQRMRVLKAMPLLEGGETVDAISARLGYGNASAFIAMFKRMTGTTPDEYRRSAA*