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SCNpilot_expt_1000_bf_scaffold_953_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1955..4735)

Top 3 Functional Annotations

Value Algorithm Source
Putative diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ99_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 936.0
  • Bit_score: 960
  • Evalue 1.70e-276
Diguanylate cyclase {ECO:0000313|EMBL:KGE80307.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 922.0
  • Bit_score: 1037
  • Evalue 0.0
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 929.0
  • Bit_score: 935
  • Evalue 1.80e-269

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2781
ATGTATAAAGTCGTCACTTGTCTGGCATTCGAGCATGACCTGCGCCTGGTCGTCCTCGCGGGGATCTTGTGTTTCCTGTCTTCCTATGTCGCTTTCCTACTTCTGCGCCGCGGGCGCGCGGGCGAGGGGCGGGCACGGCTGATCTGGCTGCTGAGCGCCGGCGCCGCCGGTGGTTTCGGCATCTGGACGACGCATTTCGTGGCGATGCTGGCTTATGATCCCGGCGTGATCATCGGCTATGCGCTGTCGCAGACGCTGCTTTCGCTGGCGATTGCGGTGCTGACCACGTCGGCGGCGGCGGCCTGCGCCGTGTTTCTCGGCGGAATGGGGGCGGCGCTGGCGGCCGGCCTGTTGTTCGGCGTCGGCGTTTCCAGCATGCATTTCATCGGCATGGCGGCGATCGAGTTTCCCGGAACCCTCGTCTGGGAGCGGATGCTGGTGCTGGCCGCCATCGTCCTCGCCGTCGTGTTTTCCGTTCCGGCCTTCCTGTTGCATGGCGCGGCGCACAGGCGCATCGCCATCCCGGCGCTGCTGATGTCGCTCGGTATCGTGCTGATGCATTTCACGGCCATGGGCAGCGTCAGCGTCATCCCTGGCGCCGGCGCGGTCTCCAGCAAGGACGTGCTGTCTGCGCATCTGATGGTGATGATGATCACCGTCGTGGCGCTGTCGCTGCTGTTTTCCGGCTTCGCGGCGGCGCTGTTTGCCATGCGCGCCGAAAAGGCGGCCGCCGATGGTGAGGCGAATTTCAAGCGGCTGGTGCAGGCGGTCAACGATTATGCCATCTACATGATCGATCTCGACGGCCGCGTCAGCAACTGGAATGCCGGGGCGGAACGGGCGCTGGGCTACAGCGAGGCCGAGATCGTCGGCCAGTCCTTCCATATCTTTCACCCGGAGGAAGAACGCCGGCGCGGCGCCCCCGCCCGCGCCCTGACGACGGCGCGCAGCGAAGGCCGCTTCGAGGTCGAAGCCTGGCGGGTGCGCAAGGATGGCACCCGCTTCTGGGCTTATGTGGTCATCGAGCCGATCTATGACGAGGAAAAGCGGCTGGGCGGCTATGCCAAGATCACCCGCGATTGCACCGGGCAGATGCTGGCCGCGCAGAAGCTGCAGCAGGCCTCGCAAAACCTCAACCTCGCCCTGAACCACATGGCCAATGCCATCTGCCTGTTCGACAGGGACGAGAAGCTGGTGCTCCACAACGGTCGGCTCGGTGAAATCTTCGGCTTCGCGCCGGAGACCGATCTCACCGGCCGGACGTTTCGCGAGCTGTGCAGCCTGCGCGTCGAGTTCGGCATCGAGCATCTGAGCGATATCGACGCCTTCTACGAACGCCACCGCCGGTTGATCGTCAGCGCCGAGGGCGGCGAGGACGTGCGCGTCATCGCCAACGGCAAGACGGTGCGCACCATCCATCGCCCGACCGGCGACGGCGCCTGGGTGACCACCATCGAGGATATCACCGAACGCGTCCGCTCCGAGGAGCGCATCGCCCATCTCGCCCGCCACGACACGCTGACCGGCCTGCCGAACCGCCGCCGCTTCACCGAGATCCTCGACGCCGCCATCGACAGCGCCGACGGGACCGGCGCGCGGGTGGCGGCGATCTGCATCGACCTCGACAAGTTCAAGGAAGTCAACGACACCTTCGGCCATGCCAGTGGCGACGCCTTGCTGTCGACGCTGGCGCAGCGCATGGTCAAGGGCACCGACCCGTCCGAAACCGTCGGCCGCTTCGGCGGCGACGAATTCGTGGCGCTGAAATCCTATTCCGAGCAATCGGAGTTGCAGGGGTTTCTCACGCGCCTGGTGTCGGCGCTCAGCGAGCATGTCGATCTCGGCCATACCACGCTGGCGCCCGCCGCCAGCCTCGGCGTCGCCATCTATCCGCAGGATGCGCAGGATCGCGAGCGGCTGCTCGGCAATGCCGACCTAGCCATGTACCGCTCCAAGTACAGCCTGGAGGAGAAGATCAGCTTCTACGAGGCGGGAATGGACGAGGCGGCCCGCGAGCGCCGGGCGCTGGCCCGCGACATCGCGCCGGCGCTGGAGGAGGAGCAGTTCTTCCTCGCCTATCAGGTGCAGAAGGCGGTGCGCACCAACGCCACGACCGGCTATGAGGTGCTGCTGCGCTGGAGTCATCCCAAGCACGGGCTGATCCCGCCTTCGACCTTCATTCCGCTGGCCGAGGAAAGCGGAGCGATCACCGCGCTCGGCGAATGGGTTCTGGAGCGCGCCTGCCGCGAGGCGGCTTCCTGGCCGCAGCCACACCGCATCGCCGTCAACCTGTCGCCGCTGCAACTGGTCGATACGCTGTTGCCGGAAAAGGTCCGCAGGGTGCTGGCCGAGACCGGGCTTTCGCCGGCGCGGCTGGAGCTGGAAGTCACCGAAAGCGCCATCATCGCCGACAAGGCCCGCGCGCTGCATGTGCTGCGCCAGATCAAGGCACTCGGCGTCACCATCGCCATCGACGATTTCGGCACCGGCTATTCGTCGCTGGAAACGCTTCGCTCCTTCCCCTTCGACAAGATCAAGCTCGACCGTTCCTTCGTCGAGGAGATCGGAAACCGCCAGTCCAAGGCCTTCGTGCGCGCCATCGTCGCGCTCGGCAAGAGCCTCGACGTCTCGGTGCTGGCCGAGGGGGTCGAGACCAGCGAGCAGTTCCGGTTCCTGCTCGCCGAAGGCTGCGACGAGGTGCAGGGCTTCCTGTTCGGCCGGCCGGGCTCGCCAGACCAGATGAAGGCCGAAGCGGCCAGCGGCGACCGCCTTGCCGGCTGA
PROTEIN sequence
Length: 927
MYKVVTCLAFEHDLRLVVLAGILCFLSSYVAFLLLRRGRAGEGRARLIWLLSAGAAGGFGIWTTHFVAMLAYDPGVIIGYALSQTLLSLAIAVLTTSAAAACAVFLGGMGAALAAGLLFGVGVSSMHFIGMAAIEFPGTLVWERMLVLAAIVLAVVFSVPAFLLHGAAHRRIAIPALLMSLGIVLMHFTAMGSVSVIPGAGAVSSKDVLSAHLMVMMITVVALSLLFSGFAAALFAMRAEKAAADGEANFKRLVQAVNDYAIYMIDLDGRVSNWNAGAERALGYSEAEIVGQSFHIFHPEEERRRGAPARALTTARSEGRFEVEAWRVRKDGTRFWAYVVIEPIYDEEKRLGGYAKITRDCTGQMLAAQKLQQASQNLNLALNHMANAICLFDRDEKLVLHNGRLGEIFGFAPETDLTGRTFRELCSLRVEFGIEHLSDIDAFYERHRRLIVSAEGGEDVRVIANGKTVRTIHRPTGDGAWVTTIEDITERVRSEERIAHLARHDTLTGLPNRRRFTEILDAAIDSADGTGARVAAICIDLDKFKEVNDTFGHASGDALLSTLAQRMVKGTDPSETVGRFGGDEFVALKSYSEQSELQGFLTRLVSALSEHVDLGHTTLAPAASLGVAIYPQDAQDRERLLGNADLAMYRSKYSLEEKISFYEAGMDEAARERRALARDIAPALEEEQFFLAYQVQKAVRTNATTGYEVLLRWSHPKHGLIPPSTFIPLAEESGAITALGEWVLERACREAASWPQPHRIAVNLSPLQLVDTLLPEKVRRVLAETGLSPARLELEVTESAIIADKARALHVLRQIKALGVTIAIDDFGTGYSSLETLRSFPFDKIKLDRSFVEEIGNRQSKAFVRAIVALGKSLDVSVLAEGVETSEQFRFLLAEGCDEVQGFLFGRPGSPDQMKAEAASGDRLAG*