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SCNpilot_expt_1000_bf_scaffold_953_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(18904..19743)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter n=1 Tax=Rhizobium giardinii RepID=UPI0003606B1F similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 259.0
  • Bit_score: 419
  • Evalue 2.50e-114
Histidine-binding periplasmic protein HisJ {ECO:0000313|EMBL:EYR83366.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 259.0
  • Bit_score: 415
  • Evalue 6.50e-113
ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 259.0
  • Bit_score: 398
  • Evalue 1.80e-108

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGCGGGCCTCGATTGCCTTTTCCAACCAAATTCCAAAAACCAAGACAAAGGGGAAATTCATGAAATCCATCGTCAAGACGCTCGTGGCGGCGCTCGCAATCGGCTTGGCCGGCATGGCGGCGGCCTCGGCCGAGCAGCTCAAGGTCGGCTTCGCCGCCGAGCCCTATCCGCCCTTCACCTCGCCGGACGCCAATGGCAACTGGGTCGGCTGGGAAGTCGATTTCAAGGATGCGATCTGCAAGGAAGCGAAGCTCGACTGCGTCGTCACCCCCGTTGCCTGGGACGGCATCATCCCGGCGCTGAACTCCAAGAAGATCGATATGATCATCGGTTCGATGTCGATCACCGAGGAGCGCCTCAAGTCGATCGATTTCACCGACAAGTATTACAATACGCCGCCCGGCATCATCGGCCCGAAGGACCAGAAGTTCGACGCCACGCCCGAGGGGCTGAAGGGCAAGGTGCTCGGCGTGCAGGTCTCCACCATCCACCAGGTCTATGCCAACAAGTATTTCGGCGCCAACGGCACCGAGATCAAGGAATACCAGACGCAGGATGAGGCCAACCAGGATCTGGCCGCCGGCCGCATCGACGCCGTGCAGGCCGATTCGATCGCGCTCGACGCCTTCCTGAAGTCCGAGCAGGGCGCCTGCTGCGACCTGAAAGGCACCGTCGCCGACGATCCGGCGATCCTGGGCCTCGGCGTCGGCATCGGCATCCGCAAGGGCGAGACCGAGCTGAAGGAAAAGCTGAACGCCGCCATCAAGGCGATCCGCGCCAACGGCACTTACGACGCCTTCTCCAAGAAGTATTTCGCCTTCGACATCTACGGAAAATGA
PROTEIN sequence
Length: 280
MRASIAFSNQIPKTKTKGKFMKSIVKTLVAALAIGLAGMAAASAEQLKVGFAAEPYPPFTSPDANGNWVGWEVDFKDAICKEAKLDCVVTPVAWDGIIPALNSKKIDMIIGSMSITEERLKSIDFTDKYYNTPPGIIGPKDQKFDATPEGLKGKVLGVQVSTIHQVYANKYFGANGTEIKEYQTQDEANQDLAAGRIDAVQADSIALDAFLKSEQGACCDLKGTVADDPAILGLGVGIGIRKGETELKEKLNAAIKAIRANGTYDAFSKKYFAFDIYGK*