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SCNpilot_expt_1000_bf_scaffold_953_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 20874..21530

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3B1J0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 211.0
  • Bit_score: 278
  • Evalue 6.90e-72
TetR family transcriptional regulator {ECO:0000313|EMBL:KGD96293.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 209.0
  • Bit_score: 278
  • Evalue 7.40e-72
HTH-type transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 205.0
  • Bit_score: 243
  • Evalue 5.90e-62

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGAGCCGCCGCGCCTTCCATCGCGCCAGCGAGGCGGAACGGCGACAGGATCTCATATCCGCAACCCTGGACTGCATCACTGAACTCGGCGTGCAGGGAGCGACCGTGCGCCAGATCGCCACGCGGGCCGGCGTTACCGGCGGCCTCATCCGTCACTATTTCGACGGCAAGGACCAGATGGTCCAGGCCGCCTACCGCGACACGATGATGGGCATGACCCGCACCGCCATCGAGGCGGCCGAATCGCTGGATGCGGATGCCCGCACCCGCCTCGGGCGCTTCATCGTCGCCAACCTGACGCCGCCGGTCACCGATCCGCGCACCCTTTCGCTATGGGCCGGCTTCATCGGCCATGTCCGCCTCGACCCGACCTTCGGCGCCATTCACCGCGAAAACTATGCGGTGTTCCGCGAGGCGCTGGAAAGACTGGTGAGCGATTGCCTGCGCGAGGCCGGCCGGGCGCCGACCGCTGCGGAATGCCGGGCGCATTCCATCGCCATCAACGGCTTGATCGACGGGCTGTGGATCGAGGGATCGCTGGCTGCCGACATGTTTGACGATCGAGAACTGGCCGAGACGGCGCTGCGCGCCGTCGAGGCGATGCTCGGCCTGCCGCCGGGCGGCCTTGGCGCAACTCCCACCATGCAAGAAGGATAG
PROTEIN sequence
Length: 219
MSRRAFHRASEAERRQDLISATLDCITELGVQGATVRQIATRAGVTGGLIRHYFDGKDQMVQAAYRDTMMGMTRTAIEAAESLDADARTRLGRFIVANLTPPVTDPRTLSLWAGFIGHVRLDPTFGAIHRENYAVFREALERLVSDCLREAGRAPTAAECRAHSIAINGLIDGLWIEGSLAADMFDDRELAETALRAVEAMLGLPPGGLGATPTMQEG*