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SCNpilot_expt_1000_bf_scaffold_953_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(23326..24735)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 469.0
  • Bit_score: 904
  • Evalue 7.70e-260
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 469.0
  • Bit_score: 903
  • Evalue 3.00e-260
isopropylmalate isomerase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036DEA08 similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 469.0
  • Bit_score: 904
  • Evalue 3.20e-260

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGAGCGCACCCCGCACCCTCTACGACAAGATCTGGGACGATCACGTTGTCAACAGCCAAGACGACGGAACCTGTCTTCTCTATATCGACCGCCATCTGGTCCATGAAGTGACCTCGCCGCAGGCCTTCGAGGGCCTGCGCATGGCCGGCCGCAAGGTTCGCCATCCCGAGAAGACGCTGGCCGTCGTCGACCACAACGTGCCGACCTCGCCGGACCGCAAGCTCGGCATCAAGAACGAGGAAAGCCGCATCCAGGTCGAGGCGCTGGCCAGGAATGCCGCCGATTTCGGTGTCGAATACTATTCCGAAAACGATATCCGCCAGGGCATCGTCCACATCGTCGGGCCGGAACAGGGCTTTACCCTGCCGGGCATGACCATCGTCTGCGGCGACAGCCACACCTCCACGCACGGCGCATTCGGCGCGCTGGCGCACGGGATCGGCACGTCTGAAGTCGAGCACGTTCTGGCGACGCAGACGCTGATCCAGAAGAAGGCGAAGAACATGCTGGTGCGCGTCGACAACCAGCTGCCGCCGGGCGTCACCGCCAAGGACATCATCCTCGCCATCATCGGCGAGATCGGCACCGCCGGCGGCACCGGCTACGTCATCGAATTCGCCGGCGAAGCGATCCGCTCGCTGTCGATGGAAGGCCGCATGACGATCTGCAACATGACGATCGAAGGCGGCGCCCGCGCCGGCCTGATCGCGCCGGACGAAACCACCTTCGCCTACGTCCAGGACAAGCCGCGCGCTCCCAAGGGCAAGGCCTGGGACATGGCGCTCGACTACTGGAAAACGCTGCATACCGACGAGGGCGCCCATTACGACCGCGTCGTCGTGCTCGACGCCGCCAACCTGCCGCCGATCGTCTCCTGGGGCTCCTCGCCGGAAGACGTCATCTCGGTTCAGGGCGCGGTTCCGAACCCGGACGAGATCCAGGACGAGAACAAGCGCGCCTCCAAGTGGCGTGCGCTCGACTATATGGGCCTGAAGCCAGGCACGAAGATCACCGACATCGCCGTCGACCGCGTCTTCATCGGCTCCTGCACCAATGGCCGCATCGAGGATCTGCGCGCCGTCGCCAAGGTCGTCGCAGGCAGGCAGGTGGCATCCACCGTCAGCGCCATGATCGTTCCGGGCTCGGGGCTGGTGAAGGAGCAGGCGGAGAAGGAAGGCCTCGACGTCATCTTCAAGGCGGCCGGCTTCGACTGGCGCGAGCCGGGCTGCTCCATGTGCCTGGCGATGAACGACGACCGGCTGAAGCCGGGCGAGCGTTGCGCCTCGACCTCCAACCGCAACTTCGAGGGACGCCAGGGCTTCAAGGGCCGCACCCATCTGGTGTCGCCCGCCATGGCGGCGGCGGCGGCGATCGCCGGCCACTTCGTCGATATCCGCGACTGGAACTGA
PROTEIN sequence
Length: 470
MSAPRTLYDKIWDDHVVNSQDDGTCLLYIDRHLVHEVTSPQAFEGLRMAGRKVRHPEKTLAVVDHNVPTSPDRKLGIKNEESRIQVEALARNAADFGVEYYSENDIRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDNQLPPGVTAKDIILAIIGEIGTAGGTGYVIEFAGEAIRSLSMEGRMTICNMTIEGGARAGLIAPDETTFAYVQDKPRAPKGKAWDMALDYWKTLHTDEGAHYDRVVVLDAANLPPIVSWGSSPEDVISVQGAVPNPDEIQDENKRASKWRALDYMGLKPGTKITDIAVDRVFIGSCTNGRIEDLRAVAKVVAGRQVASTVSAMIVPGSGLVKEQAEKEGLDVIFKAAGFDWREPGCSMCLAMNDDRLKPGERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDIRDWN*