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SCNpilot_expt_1000_bf_scaffold_953_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 25683..26165

Top 3 Functional Annotations

Value Algorithm Source
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 160.0
  • Bit_score: 277
  • Evalue 3.60e-72
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 160.0
  • Bit_score: 277
  • Evalue 1.60e-71
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2A4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 159.0
  • Bit_score: 277
  • Evalue 1.10e-71

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCGCATCGGCCTGTTTGCGGTTGGCCGGCTCAAAGCCGGGCCTGAGAAGGATCTTGCGGCCCGTTACCTGGAGCGGCTGGCCAAGGCAGGCCCTGCCATCGGCATCGAGCTTTCGCGCGTCGCCGAGGTGGGGGAAAGCCGCGCCTCGAATGCGGAAACGCGCAAGCGCGAAGAGGCGGTCCTGCTCGACAAGGCCCTGCCCGAGGGCGCCATCCTGATCCTGCTCGACGAGCGCGGCAAGGCGCTCGACAGCGAGGCTTTCGCCGGCCTGATCGGCCAGTATCGCGACCAGGGCAAACGTGACCTCATGGTCGCCATCGGTGGCGCCGACGGCCTGGATCCTGCGCTGTACCAGAAGGCCGATGCCGTCATTTGTCTCGGCAAGATGACCTGGCCGCACCAGCTCGTGCGCATCCTGATCGCCGAACAGCTTTACAGGGCGGTGACGATCCTCTCCGGCCATCCCTATCACCGGGTCTGA
PROTEIN sequence
Length: 161
MRIGLFAVGRLKAGPEKDLAARYLERLAKAGPAIGIELSRVAEVGESRASNAETRKREEAVLLDKALPEGAILILLDERGKALDSEAFAGLIGQYRDQGKRDLMVAIGGADGLDPALYQKADAVICLGKMTWPHQLVRILIAEQLYRAVTILSGHPYHRV*