ggKbase home page

SCNpilot_expt_1000_bf_scaffold_953_curated_35

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 40846..41451

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 201.0
  • Bit_score: 390
  • Evalue 2.80e-106
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 201.0
  • Bit_score: 390
  • Evalue 1.20e-105
3-isopropylmalate dehydratase small subunit n=7 Tax=Rhizobium meliloti RepID=LEUD_RHIME similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 201.0
  • Bit_score: 390
  • Evalue 8.80e-106
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGACAAGTTCGTCAAGCTCACCGGCGTCGCCGCGCCGCTTCCGGTCGTCAACATCGACACCGACATGATCATTCCGAAGGATTACCTGAAGACGATCAAGCGCACCGGCCTCGGCACCGGCCTGTTCGCCGAAGCGCGCTACAACGAGGACGGCACGCCGAACCCGGATTTCGTGCTCAACAAGCCCGCCTACCAGAACGCCCAGATCCTCGTTGCCGGCGACAATTTCGGCTGCGGCTCCTCGCGTGAACATGCACCGTGGGCGCTGCTCGATTTCGGCATCCGCTGCGTCATCTCCACCAGCTTCGCCGACATCTTCTACAACAACTGTTTCAAGAACGGCATCCTGCCGATCGTCGTCAGCCCCGAAGATCTCGACAAGCTGATGGACGACGCCAGCCGCGGCTCCAACGCCGTGCTGACCGTCGACCTCGAAGCCCAGGAAATCAGCGGCCCGGATGGCGGCCGCATCTCCTTCGAGATCGACGCCTTCAAGCGCCATTGCCTGTTGAACGGCCTCGACGACATCGGCCTGACCATGGAAAAGGCCGCCAGCATCGACAGTTTCGAAAAGGCCAACGCCGCTTCGCGCCCCTGGGCCTGA
PROTEIN sequence
Length: 202
MDKFVKLTGVAAPLPVVNIDTDMIIPKDYLKTIKRTGLGTGLFAEARYNEDGTPNPDFVLNKPAYQNAQILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIVVSPEDLDKLMDDASRGSNAVLTVDLEAQEISGPDGGRISFEIDAFKRHCLLNGLDDIGLTMEKAASIDSFEKANAASRPWA*