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SCNpilot_expt_1000_bf_scaffold_951_curated_22

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19260..19673)

Top 3 Functional Annotations

Value Algorithm Source
Short chain dehydrogenase RhaD {ECO:0000313|EMBL:EYR82047.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR82047.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 137.0
  • Bit_score: 259
  • Evalue 3.80e-66
Short chain dehydrogenase RhaD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM21_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 137.0
  • Bit_score: 259
  • Evalue 2.70e-66
rhaD; short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 139.0
  • Bit_score: 257
  • Evalue 1.90e-66

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
GTGTTCCGCACCCAGAAGGCCGGCGGCAATATCGTCTTCGTCGCCTCCAAGAATGGCTTGGCCGCCTCGCCGGGCGCTTCGGCTTATTGCACGGCCAAGGCGGCCGAGATCCATCTTGCCCGCTGCCTGGCGCTGGAGGGGGCGAGCGCCCAGATCCGCGTCAACACCGTCAATCCCGATGCCGTGCTGCGCGGCTCGAAGATCTGGTCCGGCGAATGGAAGGAACAGCGCGCCGCTGCCTACAAGACCGACGACCTGGAGGCGCATTACCGCGAGCGCTCGATGCTGAAGCTCAGCGTCTTCCCGGAGGATATCGCCGAGGCGATCTATTTCCTCGCCTCCGACATGTCGGCCAAATCGACCGGCAACATCATCAACGTCGACGCCGGCAATCAGCAGTCGTTCACGCGCTGA
PROTEIN sequence
Length: 138
VFRTQKAGGNIVFVASKNGLAASPGASAYCTAKAAEIHLARCLALEGASAQIRVNTVNPDAVLRGSKIWSGEWKEQRAAAYKTDDLEAHYRERSMLKLSVFPEDIAEAIYFLASDMSAKSTGNIINVDAGNQQSFTR*