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SCNpilot_expt_1000_bf_scaffold_951_curated_53

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 46354..46773

Top 3 Functional Annotations

Value Algorithm Source
Flagellar basal-body rod protein FlgC n=1 Tax=Rhizobium sp. CF142 RepID=J1TD61_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 139.0
  • Bit_score: 233
  • Evalue 1.20e-58
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 139.0
  • Bit_score: 234
  • Evalue 1.00e-58
flgC; flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 139.0
  • Bit_score: 229
  • Evalue 5.70e-58

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGATCCGCTTTCCGCGTCTATGAAAATCGCCGGCAGCGGCCTGGAAACCCAGGCGACGCGTCTGCGTATCGTCTCCGAAAACATTGCCAACGCCCGTTCCACCGGCGACACGCCCGGCGCCGATCCCTATCGCCGCAAGACGCTGACCTTCGGCAGCGAGCTGGACCGCGCCACCGGCGTGACGCTCGCCACCGTCAAGAAGCTCGGCGTCGACAAGTCGAAATTCACCGAGGAATACGAGCCGGGCAACCCGGCCGCCGACGAACGCGGCATCGTCAAGGTGCCCAACGTCAACGTGCTCATCGAAATGGCCGACATGCGCGAGGCCAATCGCTCCTACGACGCAAACCTTCAAACCATCAAGCAGACGCGCGACCTGATCTCCGCCACGCTCGATCTTCTCAAGGCATCGCAATGA
PROTEIN sequence
Length: 140
MDPLSASMKIAGSGLETQATRLRIVSENIANARSTGDTPGADPYRRKTLTFGSELDRATGVTLATVKKLGVDKSKFTEEYEPGNPAADERGIVKVPNVNVLIEMADMREANRSYDANLQTIKQTRDLISATLDLLKASQ*