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SCNpilot_expt_1000_bf_scaffold_1782_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(8608..9501)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 296.0
  • Bit_score: 586
  • Evalue 1.60e-164
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EYR79407.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 296.0
  • Bit_score: 586
  • Evalue 2.30e-164
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.3
  • Coverage: 230.0
  • Bit_score: 106
  • Evalue 1.20e-20

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCCTGATTTCAAAGACGATACACGCTCCTCGGGTGCCGAGTTGCTTCATGATGGCGAGCACTGGCTGCTCCGCCCACACATGGCCGAGCAACCCTCGCGCAGCGGCCCAGGTTTGGTACCCGCGCTGGAAAACACCATTGCGGTACTCCAGTACTTGAACGGAACGGCGCCCCACGAAGCATCCCTGGCGGAAATCGTCGCCGCGCTCGGCATTTCAAAAACCCACTGTCATTCCATTCTCAAGACACTGGTACATTTCGAGTGGCTGAAATACGATCAGCGTTCCAGAACCTATCGGTTGCATTCCGGCATTTTCACGAGCGCTTCCAGCCTGCTCAATTCACCGGTCATGGATGCGGTCCGCCGTAATCTCACCGCGCTTGTCCATCGTGTGGATATACCGTGCCTGCTGACCCAGCCGATGAATGACGGCACCTACATCGTTATCGACAAATTCAACGGCCCAACGAGTATGGAACTGTCTTTCCCCGTGGGGCATCGCTTTCCGCGCGACGCCTGTGCACAGATGCGGGCATACCTGGCGTGGCAATCACCGGAGCGTATCGACGCCTGGTTCAATAATTGGCAGCCAACCCGCTACACCTCGCGCAGCCCGTTAACGGAAGAAGATGTGCGTGCAGGCATCGAGGCTACCCGGCGCCGAGGTTATGCCGTCAGCAAGGGTGAATTCACCGAAGGCATCATGGCGATCGCCCTGCCCATCTTCGATCGGGACGGCGAGGTCTCCTATGTCTTCAATTGCTCGTTCATGATCGATCGTTTCCTGCCGCTAGAGGAAGCGGTCGCGCGCGAAATGCTCGTGGCGCTACGCGACATTCATCGCGACACACTGGCGCGGCCACCGGCAGCGCCAGCTTTTATCGGATCGTGA
PROTEIN sequence
Length: 298
MPDFKDDTRSSGAELLHDGEHWLLRPHMAEQPSRSGPGLVPALENTIAVLQYLNGTAPHEASLAEIVAALGISKTHCHSILKTLVHFEWLKYDQRSRTYRLHSGIFTSASSLLNSPVMDAVRRNLTALVHRVDIPCLLTQPMNDGTYIVIDKFNGPTSMELSFPVGHRFPRDACAQMRAYLAWQSPERIDAWFNNWQPTRYTSRSPLTEEDVRAGIEATRRRGYAVSKGEFTEGIMAIALPIFDRDGEVSYVFNCSFMIDRFLPLEEAVAREMLVALRDIHRDTLARPPAAPAFIGS*