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SCNpilot_expt_1000_bf_scaffold_1866_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4388..6166

Top 3 Functional Annotations

Value Algorithm Source
bicyclomycin resistance protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000379E61E similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 602.0
  • Bit_score: 886
  • Evalue 1.50e-254
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 602.0
  • Bit_score: 881
  • Evalue 2.00e-253
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJJ31661.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 602.0
  • Bit_score: 881
  • Evalue 5.20e-253

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1779
GTGCGCCGTCTCTTCGCCATAGCCCTCGTCTCCCTCCTTTTCTGGAGCCCGCTTGCCGCCGAACCGCTGCATGGCATCGCCATGCATGGAGACGTGTCGTTGCCCAGGGATTATGCGCATTTCCCTTACGTCAATCCCGACGTCAAGAAGGGCGGCCGGATCACCTACGGCGTCGTCGGCACCTTCGACAATCTCAACCCCTTCATCCTGAAGAGCATGCGCACCACGGCGCGCGGCATGTGGGATCCGCAATTCGGCAACATGATGTTCGAATCGCTGATGACCCGCTCCGCCGACGAGCCCTTCTCGCTCTATGGTTTGCTGGCCGAAACCGTGGAATGGGACGAGGCGCGCAGTTTCATCCAGTTCAACCTCGATCCGCGCGCACACTGGTCGGACGGCAAGCCGGTGACGCCGGAGGATGTGATCTTCACCTTCGAGCTGCTGCGCGACAAGGGCCGCACGCCCTTCAGCCGGCGCATGGAGGCAGTCGACAAGCTGGAAAAGGTCGGGGAGCGCTCGGTACGCTTCACCTTCAACGACAAGGCAGACCGCGAGACGCCGCTGATCATCGCCGCCTACACGCCCGTGCTGCCGAAACATGCGACCGTCCCTGAAAGCTTCGAGCAATCGACGCTGGCGCCGCCAATCGGTTCAGGCCCCTACAGGATCAAGTCGATCAATCCCGGCGAGCGCATCGTGTACAGGCGCGATCCGAACTATTGGGGCAAGGACATCCCATCCAAAGTCGGTTTCGACAATTACGACGAGATCGCAGTGGAATATTTTCTGCAGGAAAGCACGCTGTTCGAGGCCTTCAAGAAGGGCGAGGTCGATATCTATCCCGAAGGCAATCCCAGCCATTGGGATCGGGCCTATGATTTCCCCGCGGTCGCCTCTGGCAAAGTGATCAAGGACGTATTCAAGCCGAAACTGCCAACCGGCATGCTCGGCTTCGTGTTCAACACCCGCCGCCCCTATTTCGCCGATGCCCGGCTGCGCAAGGGCCTGTCGCTGGTGTTCGATTTCGAATGGGCAAACCGCAACCTGTTCGAAAATGCCTATACCCGCACCCAGAGCTACTGGCAGAATTCCGACCTTTCCAGCCTCGGCGTGCCGGCCAGTCCGCTGGAGCGCGAGATGATGGGCGACATCACCGCACGCATCGATCCCGCCGTGCTGGACGGCAGCTATCGTCTGCCGGTGACCGATGGGTCGGGTCGGGACCGCAAAGTACTGAAACAGGCCGTCGACCTGCTGAAGCAGGCCGGCTATTCGATCCGGGGCGGCCAGATGGTCGATGCCAAGGGAACGCCGCTCGCCTTCGAGATCATGACCCAGAATGCCGATCAGGAGAAGCTGGCGCTCGCTTATCAGCGCTCGCTCCGGGCCTTGGGCATCGCGCTGACGGTGCGTACCGTCGACGATTCGCAATATCAGAACCGGACGATCGCCTTCAATTTCGACATGGTGATGAAAAGCTTCACCTCCTCGCTGTCGCCGGGCATCGAGCAAGTGTCGCGCTGGGGGTCGCTTGCCCGCGACAGGCAGTGGAGCGAGAACTACGCCGGNNNNNNNNNNNNGACCGCCCGCACGGCCGAAAGCTTCCAGGCGGCGGTGCGTTCCTTCGACCGGATGCTGATTTCAGGCAGCTATTTCGTACCGCTCTATCATCTCGGCGAACAATGGATCGCCCGTCACAAGACCATCGGAAGACCCGACACCCTGCCGCTCTACGGTTATCAACTTCAGACCTGGTGGGATGCGCGGGCACAATAG
PROTEIN sequence
Length: 593
VRRLFAIALVSLLFWSPLAAEPLHGIAMHGDVSLPRDYAHFPYVNPDVKKGGRITYGVVGTFDNLNPFILKSMRTTARGMWDPQFGNMMFESLMTRSADEPFSLYGLLAETVEWDEARSFIQFNLDPRAHWSDGKPVTPEDVIFTFELLRDKGRTPFSRRMEAVDKLEKVGERSVRFTFNDKADRETPLIIAAYTPVLPKHATVPESFEQSTLAPPIGSGPYRIKSINPGERIVYRRDPNYWGKDIPSKVGFDNYDEIAVEYFLQESTLFEAFKKGEVDIYPEGNPSHWDRAYDFPAVASGKVIKDVFKPKLPTGMLGFVFNTRRPYFADARLRKGLSLVFDFEWANRNLFENAYTRTQSYWQNSDLSSLGVPASPLEREMMGDITARIDPAVLDGSYRLPVTDGSGRDRKVLKQAVDLLKQAGYSIRGGQMVDAKGTPLAFEIMTQNADQEKLALAYQRSLRALGIALTVRTVDDSQYQNRTIAFNFDMVMKSFTSSLSPGIEQVSRWGSLARDRQWSENYAXXXXXTARTAESFQAAVRSFDRMLISGSYFVPLYHLGEQWIARHKTIGRPDTLPLYGYQLQTWWDARAQ*