name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1866_curated_1
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..377
|
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Glutamine synthetase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HIX4_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(518..1558)
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000370B6D9
KDPG and KHG aldolase {ECO:0000313|EMBL:EYR79922.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative TRAP transporter solute receptor; K07080
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_3
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1581..2699)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7J7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF67244.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2920..3249
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7Y3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87087.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hemimethylated DNA binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3385..4020)
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U945_RHIRD
Invasion protein B {ECO:0000313|EMBL:CDN93714.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Invasion protein B
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4388..6166
|
bicyclomycin resistance protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000379E61E
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJJ31661.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_7
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6260..6931
|
Putative dithiol-disulfide isomerase protein (Involved in polyketide biosynthesis) n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJ30_RHIET
Putative dithiol-disulfide isomerase protein (Involved in polyketide biosynthesis) {ECO:0000313|EMBL:EGE55516.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
dithiol-disulfide isomerase (involved in polyketide biosynthesis)
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_8
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7061..7993
|
Uncharacterized protein n=2 Tax=Agrobacterium RepID=F0L670_AGRSH
Transporter {ECO:0000313|EMBL:KJF66433.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7995..8465)
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MGP2_RHIL3
Osmotically inducible OsmC-like protein {ECO:0000313|EMBL:KEC75651.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8526..12032)
|
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Transcription-repair-coupling factor n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZP8_9RHIZ
mfd; transcription-repair coupling factor
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_11
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12029..12259)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NEP0_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF19540.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein; K09159 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_12
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12793..14883
|
recG; DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration (EC:3.6.1.-)
DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PU40_9RHIZ
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDN54097.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_13
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14893..15561)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WPA3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK84853.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15586..16080)
|
putative acetyltransferase; K03824 putative acetyltransferase [EC:2.3.1.-]
Putative acetyltransferase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A6H8_RHIFH
GCN5 family acetyltransferase {ECO:0000313|EMBL:KDP75527.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_15
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16077..17903)
|
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1156935 species="Bact
glmS1; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q2P0_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18003..19367)
|
Bifunctional protein GlmU n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KPA1_RHILT
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
glmU; UDP-N-acetylglucosamine diphosphorylase
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_17
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19538..21460)
|
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JFY1_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAJ91128.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_18
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21723..22934)
|
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FH14_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU43488.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23414..25021
|
Fumarate hydratase protein, class I {ECO:0000313|EMBL:ACE91429.1}; EC=4.2.1.2 {ECO:0000313|EMBL:ACE91429.1};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
fumarate hydratase n=1 Tax=Rhizobium phaseoli RepID=UPI0002EE7AE6
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_20
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25245..26312
|
diguanylate cyclase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037700A1
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK82029.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
sensory box/GGDEF family protein; K13590 diguanylate cyclase
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26359..26745)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C605_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79128.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26778..28619)
|
Glutathione-regulated potassium-efflux system protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLQ7_9RHIZ
Strain MEJ076 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98961.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
kefBC; Glutathione-regulated potassium-efflux system protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28634..29008)
|
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A758_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:AHK44548.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_24
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29167..30213
|
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JFZ0_AGRRK
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_25
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30370..31275
|
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VLH7_RHILT
Signal protein PDZ {ECO:0000313|EMBL:KGE02110.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
PDZ/DHR/GLGF domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_26
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31396..33933)
|
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UGG1_9RHIZ
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ENN89263.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_27
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34175..34792
|
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
mobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77]
Molybdenum cofactor guanylyltransferase n=1 Tax=Rhizobium sp. RepID=L0NH58_RHISP
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_28
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(36022..36543)
|
Membrane protein n=1 Tax=Ochrobactrum intermedium 229E RepID=U4V4R9_9RHIZ
Membrane protein {ECO:0000313|EMBL:ERM00975.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
OmpA/MotB domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1866_curated_29
unknown
|
Not on your lists |
36741..37322
|
This feature has no annotations |