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SCNpilot_expt_1000_bf_scaffold_1866_curated_25

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 30370..31275

Top 3 Functional Annotations

Value Algorithm Source
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VLH7_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 301.0
  • Bit_score: 459
  • Evalue 2.30e-126
Signal protein PDZ {ECO:0000313|EMBL:KGE02110.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 301.0
  • Bit_score: 463
  • Evalue 2.20e-127
PDZ/DHR/GLGF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 301.0
  • Bit_score: 456
  • Evalue 4.70e-126

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGATATCGACAGCATTCAGCGCTCGATCGTCGCCGTCAGCGCGACGATCCCCGACAACGCATACACCGCAAAGACGCTCGGCACCCACCGCGAAGGCAGTGGGGTGGTCATTCGCGAAAACGGCCTCGTCTTGACCATCGGCTATCTGATCACCGAAGCCACGCAGGTCTGGCTGACACTGCATGACGGCCGCATCGTCGCCGGCCATGCGCTGGCCTATGACCAGGAAACCGGTTTCGGCCTCATCCAGGCGCTCGGCGCCCTCGACGTCCCCCCGGTCAGGTTCGCGGAATCCGCCGCCGTCAAAATCGGCGACAGCGTCACCCTCATCGACGGCAGTCGCCATGCGGTGAAAAGCCGGATCGTGGCGCGGCAGGAATTCGCCGGATACTGGGAATACCTGCTGGACGACGCTCTGTTCATCGCCCCAGCCCACCCCTCCTGGGGCGGAGCGGCGCTCATCGATGCCGAAGGGCGGCTGGTCGGCATCGGCTCGCTGCGGCTGCAGATGAGTCGCGGCGGCGAGGTCGCGGACATCAACATGATCGTGCCGATCGACCTGCTCGCGCCGATCCTCGACGACGTGCTCAACACCGGCCAGGTGAATCGCGCCCCTCGCCCCTGGCTCGGCGCCTTCTCGGCGGAAGCCAGCGGCGGCGTGGTGGTAATGAGCGTCGCCGACCACAGCCCGGCGCAGCTTGCCGGCCTCAAGCGCGGCGACGTCATTTCGGAAATCCGCGACGGTGAAGTCGGCGGCCTTGCCGATTTCTACCGCAAGGTCTGGGACAGCGGCCCGGCCGGCGTCGAAATTCCCATGCGCGTCATTCGCGACGGGCGTGACGCCTGGGTACGCGTCAAATCCGCCGACCGCAACGCCTTCCTGCAGAAGCCGCAGCTTCAGTAA
PROTEIN sequence
Length: 302
MDIDSIQRSIVAVSATIPDNAYTAKTLGTHREGSGVVIRENGLVLTIGYLITEATQVWLTLHDGRIVAGHALAYDQETGFGLIQALGALDVPPVRFAESAAVKIGDSVTLIDGSRHAVKSRIVARQEFAGYWEYLLDDALFIAPAHPSWGGAALIDAEGRLVGIGSLRLQMSRGGEVADINMIVPIDLLAPILDDVLNTGQVNRAPRPWLGAFSAEASGGVVVMSVADHSPAQLAGLKRGDVISEIRDGEVGGLADFYRKVWDSGPAGVEIPMRVIRDGRDAWVRVKSADRNAFLQKPQLQ*