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SCNpilot_expt_1000_bf_scaffold_1866_curated_28

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(36022..36543)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Ochrobactrum intermedium 229E RepID=U4V4R9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 172.0
  • Bit_score: 139
  • Evalue 3.00e-30
Membrane protein {ECO:0000313|EMBL:ERM00975.1}; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 172.0
  • Bit_score: 139
  • Evalue 4.30e-30
OmpA/MotB domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 170.0
  • Bit_score: 119
  • Evalue 1.30e-24

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Taxonomy

Ochrobactrum intermedium → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGCTCGACAGCGACAAGGATGCGGACAATCGCGGCGGCCAGTCCGCCCGCGACGAACGCCGCCGCCAGCGCGAAGCACAGCGCGGCGAGCAGGCCGCGCCCCCGCCGAAGAACGACGCCGAGGCTCAGGCCGCCGCGCCGCAGGTGAACGCGGAGCAGTTGCGCAAGCAGATCGAGGAAAAGGGCCAGCGCATCGACAAGGCCCCGCAATTTGCCCTTCCGGCCGTCATAGAGGGCGGTGCCGCCATGCAGTCGGGCGCCGACGGCCAGAATGCCGGTGGCGGTCGAGATCGCCGCAACCGTCAGGACGGAGAAAGCGGCAATACGACCATCAACAACACCACCAACACAACCAACAATGTCGTCATCCTGCAGCAGAACGACAATCGCACCGTGCTGCGCGTCGACAACCACATGGTGGTGCGCGGCGACGATCGTCCGCGCCTCAGCCGCGACGCCGAGGAAACCCACTACGACCGCCTGCCGCGCGGCCGNNNNNNNNGCCGAATGGCGTGCGCCTGA
PROTEIN sequence
Length: 174
VLDSDKDADNRGGQSARDERRRQREAQRGEQAAPPPKNDAEAQAAAPQVNAEQLRKQIEEKGQRIDKAPQFALPAVIEGGAAMQSGADGQNAGGGRDRRNRQDGESGNTTINNTTNTTNNVVILQQNDNRTVLRVDNHMVVRGDDRPRLSRDAEETHYDRLPRGXXXXRMACA*