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SCNpilot_expt_1000_bf_scaffold_1786_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 19573..20268

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0P0_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 220.0
  • Bit_score: 264
  • Evalue 1.40e-67
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 220.0
  • Bit_score: 264
  • Evalue 4.50e-68
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADH91361.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 220.0
  • Bit_score: 264
  • Evalue 2.00e-67

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGACCTTCTAAACCTGTCGGTTGTTGCGGAATACTATCCCGTGCTGCTGCGCGGCTTCGGCATGACTATCCTGATGACGCTGATCGTCATCACGTTGAGCTTGACCCTGGCAATCCCGGTGGCGCTGAGCAGAATGTCGGGGAATTTCCTGGTCAGGCTGGTCGGCGGAACTTATGTCGAGCTGCTGCGCGGCACCCCCCTCGTCCTGCAGCTCGTCTACATTTATTTCGTGCTGCCGGGTGTCGGAATCAGGCTCGACGGCTTCGTCGCCGCGCTGGTGGCGTTGACGCTGCATTACACTGCCTATCTGAGCGAGGTCTACCGTGCGGGAATTCAATCGGTTCCCAAGGGGCAGACGCAGGCGGCTTCGGCGCTGGGCATGTCCCGCGGCCAGACATTCATACGCATCGTCCTGCCGCAGGCCGTGCGTACCGTGACACCGGCGCTTGGCAACTATTTCATCTCGCTCTTCAAGGATACGGCTCTCGCGTCGGTCGTCACCGTGCAAGAACTTCTCTTTTCGGGGCAGATCATCGCGGCGCGAACCTATCAGTACTTCACCATCTACACCGTGTGCATGATCATGTATTTCAGTGTGGGTTACCCGGCCGCTCTTTTTGTGCGCTGGCTGGAAAAACGGACCAGCGGCGGCTATGCCCGCAGGCGGCGGCGCCAGAAGGGCGGACAGGCATGA
PROTEIN sequence
Length: 232
MDLLNLSVVAEYYPVLLRGFGMTILMTLIVITLSLTLAIPVALSRMSGNFLVRLVGGTYVELLRGTPLVLQLVYIYFVLPGVGIRLDGFVAALVALTLHYTAYLSEVYRAGIQSVPKGQTQAASALGMSRGQTFIRIVLPQAVRTVTPALGNYFISLFKDTALASVVTVQELLFSGQIIAARTYQYFTIYTVCMIMYFSVGYPAALFVRWLEKRTSGGYARRRRRQKGGQA*