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SCNpilot_expt_1000_bf_scaffold_1786_curated_28

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 23838..24992

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUY8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 384.0
  • Bit_score: 626
  • Evalue 1.80e-176
Major facilitator superfamily protein {ECO:0000313|EMBL:EYR80789.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 384.0
  • Bit_score: 626
  • Evalue 2.50e-176
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 372.0
  • Bit_score: 208
  • Evalue 2.80e-51

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGCAGTCCTCGTCTTCATCGGTCCTGTCGCCGGACTGGTCGGCCATCATCGCCGTCGTGCTGGGCGTGACTGCGTTTTCCGTGGCGCAGGGGCTCACCTATCCGCTGGTCTCGCTGACGCTGGAGGCGCAGGGCTATTCCTCGTCGCTGATCGGCGTCAACGCCATCGCCTATGCCGCCGGCATGGGGGCCTCGACGCTGCTCGTCGGCAGCCTTACCGCGCGCTGGCGACCCGACCGGCTGATCATCTTCAGCCTCGTGGTCTGCTCGCTGTGCCTGGCCACCTTCGCGGCCTCGTCGTCCTTCGTCGTCTGGGGCGTCGCGCGTTTCCTGCTCGGCTTCTTCACCAGCATGATCTTCATGCTGGGTGAGGCCTGGCTGAACGCCGCCTGTCCGGACCGCCTGCGCGGTCGCGTCTCCGGCCTTTACGGCATGGGCATCTGCGGCGGCTTTGCCGCGGGGCCTCTGGCCATTCCGCTGTTCGGCAGCGCCGGCGGGCTCGGTTTTGCACTGACGGCCGTCTATCTCGCGATCGTCGCCTTCGCCACCGCGATGCTGATGTTTTCAACCAGGACGGTGCCGGAACCGTCCTCGACGGCCGATGTCTTCCGCTTCTTCAAGGCCGCTCCCGTTCTCGTCGGCATGGTCTTCATCTTCGGCTTTGCCGATATCGCGGCGATTTCCGCCATGCCGGTCTATTTCGTGAAGATGGGCTACAGCGAATCCTTCGCCGCCCTCAGCGTCACGGTGCTGGCATTGCCGACCGCGCTTGCCCAGCCCTTTATCGGCGTGCTGCTCGACAAGCTGCCGCGCGAACGCGTGGCGCTCGCCGCCGTCGGCACCGCCGCTTTCAGCTATCTCATGCTGCCGTCGATGACGTCGCAAATCGCGATCCTCGGCATTTTCGCCCTGATGGGCGTGGCGGTGTTCTCGCTTTACACCTGCGCGCTCACCATCCTCGGCGAGCGCTACAGCGGGGCCATGCTGGTCGCTGGTGCGGCCGCCTTCGCGCTCGTCTATGCGGCAGGCAGCGCCGCCGGCTCGGGCCTGACCGGCGCCGTCATGGAAGCCGCCGGCCCGCAAGCCGGCCCGCTCTCCGTCGGCCTCGGCCTCGCCGCCTTCACCGTCTTGCTGGTGTTTGCGCGCCGGCGGTAG
PROTEIN sequence
Length: 385
MQSSSSSVLSPDWSAIIAVVLGVTAFSVAQGLTYPLVSLTLEAQGYSSSLIGVNAIAYAAGMGASTLLVGSLTARWRPDRLIIFSLVVCSLCLATFAASSSFVVWGVARFLLGFFTSMIFMLGEAWLNAACPDRLRGRVSGLYGMGICGGFAAGPLAIPLFGSAGGLGFALTAVYLAIVAFATAMLMFSTRTVPEPSSTADVFRFFKAAPVLVGMVFIFGFADIAAISAMPVYFVKMGYSESFAALSVTVLALPTALAQPFIGVLLDKLPRERVALAAVGTAAFSYLMLPSMTSQIAILGIFALMGVAVFSLYTCALTILGERYSGAMLVAGAAAFALVYAAGSAAGSGLTGAVMEAAGPQAGPLSVGLGLAAFTVLLVFARRR*