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SCNpilot_expt_1000_bf_scaffold_1230_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(8886..9989)

Top 3 Functional Annotations

Value Algorithm Source
Leu/Ile/Val-binding protein 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0Z5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 368.0
  • Bit_score: 653
  • Evalue 1.70e-184
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR79781.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 368.0
  • Bit_score: 653
  • Evalue 2.40e-184
braC1; amino acid ABC transporter, substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 360.0
  • Bit_score: 579
  • Evalue 5.90e-163

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGAAGAAGCAGATTTTCGCAGGCGCAACGCTTGCCGCCTCGCTCGTCTTCGCGCCGCTCGCCCATGCGGATATCGTCATCGGCCTCGTGGCGCCGCTGACCGGCCCGGTCGCCGCCTATGGCGATCAGGTCAAGAACGGCGCCCAGGCCGCCGTCGACGAGATCAACAAGAACGGCGGCATCAAGGGCGAGAAGATCGTGCTGAAGCTGGCCGACGATGCCGGCGAGCCGAAGCAGGGCGTCTCCGCCGCCAACCAGATCGTCGGCGAAGGCATCCATTTCGTCGTCGGCCCGGTGACCTCCGGCGTCGCCATCCCGGCTTCGGAAGTGTTTGCCGAAAATGGCGTGCTGATGGTCACCCCGACCGCCACCGCCCCGGAACTGACCGCGCGCGGCCTTGCCAACATCCTGCGCACCTGCGGCCGTGACGACCAGCAGGCCGAAGTCGCCGCCGCCTACGTGCTGTCGAAGGCGAAGGACAAGAAGGTCGCCGTCATCCATGACAAGGGCGCCTATGGCAAGGGCCTCGCCGATGCCTTCAAGGCGGCGCTGAACGCCGGCGGCGTCAACGAAGTGCTCTATGACACCGTCAATCCCGGCGACAAGGACTTCTCGGCGCTGATCACCCGCCTGAAGTCGCAAGGCGTCGAAGTCATCTATTTCGGCGGTTATCATCCGGAAGGCGGCCTGCTGGCCCGTCAGCTGAAGGATCTCTCGGTCAACGCCCAGATCATCGGCGGCGAAGGCCTGTCCAACACCGAATTCTGGGCGATCGGCAACGAAGCCGCTGCCGGCACGCTGTTCACCAACGCCTCCGACGCGCTGAAGAGCCCGGACTCCCAGGCCGCCGTCAAGGTCCTGGCCGAAAAGGGCATCCCGCCGGAAGCCTTCACGCTCAACGCCTATGCCGCCGTCGAAGTTCTCAAGGCCGGCATCGAAAAGGCGGGCGCGGAAGATTCGGCCGCCGTCGCCACGGCGCTGAAGTCCGGCGACGCCATCCCGACCGCCATCGGCAAGCTGACCTATGGCGAAAACGGCGACCTGACCTCGCAGAGCTTCTCGCTGTTCAAGTGGGAAAACGGCAAGATCGTCTCCGCCGAATAA
PROTEIN sequence
Length: 368
MKKQIFAGATLAASLVFAPLAHADIVIGLVAPLTGPVAAYGDQVKNGAQAAVDEINKNGGIKGEKIVLKLADDAGEPKQGVSAANQIVGEGIHFVVGPVTSGVAIPASEVFAENGVLMVTPTATAPELTARGLANILRTCGRDDQQAEVAAAYVLSKAKDKKVAVIHDKGAYGKGLADAFKAALNAGGVNEVLYDTVNPGDKDFSALITRLKSQGVEVIYFGGYHPEGGLLARQLKDLSVNAQIIGGEGLSNTEFWAIGNEAAAGTLFTNASDALKSPDSQAAVKVLAEKGIPPEAFTLNAYAAVEVLKAGIEKAGAEDSAAVATALKSGDAIPTAIGKLTYGENGDLTSQSFSLFKWENGKIVSAE*