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SCNpilot_expt_1000_bf_scaffold_1230_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 20787..21659

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HB52_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 290.0
  • Bit_score: 306
  • Evalue 3.10e-80
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJB07645.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 290.0
  • Bit_score: 306
  • Evalue 4.40e-80
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 290.0
  • Bit_score: 300
  • Evalue 7.10e-79

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGAGGCAGCTATAGGACAGCAGGTTACGGAAGGGCTTGAACGTTCGTGCAAGGGCGAGGAGCGGGTGCGCAGCATCCATGCCGCCGGCCGGCCGGGCTTCGAATTCATGGAGGCGCGTTTCTTCGGCGATGTCTTCGAGCCGCATCGCCATGACACCTATGCCATCGGCCTGACGCTCGGCGGCGTCCAGCGTTTTCGCTATCGCGGCGAAGAGCGGCAAAGTCTGCCCGGAGATATCCTCGTTTTGCATCCCGACGAGGAGCATGACGGCGGCGCCGGCAACGAGGCGGCGCTGCACTACTGCATGCTTTATGTACCGCCCGACCTGCTGGCCCCGGCATTGACCGGGCGCGGCCGCGCCCTGCCCTTCGTCCGCGATCCCGTCTTCCACGATCCGGCGTTACGCGGTAAAATCCGTGCCTGCTTTTCAGAGATCGAGAGCCCGGATGCGGACGGCTTGCTTCTCGACGACCTGCTGGTCGATGTCGCCGAAGGCCTGGCGTCGCATGCCGGGGGGCTCCTCCCGCCGCCGCGCAGCCAGCCGCTGCGACAGGTGAGGGCCGCCTGCGCCTTCATGGAGGCGCATCTCGCCCGCAACATCCATTCGACGGAACTGGAAGCCATCACCGGCATCGACCGTTTCGCCCTGTCGCGGGCGTTCCGGGCCGTGCTGCATACCTCGCCGCACCGCTATTTCCTGATGCGGCGGCTGGATCGTGCCCGGTTGCTGCTTCGCGACGGCACGCCGCTCGCCGAAGCTGCCGCCGAAACCGGCTTCGCCGACCAGGCGCATTTCTCCCGCCATTTCAAGAAAGCCTATGGCCTGACGCCCGGCCGATGGAACGCGCTCCTTTCCCGCAGCCAACAGTAG
PROTEIN sequence
Length: 291
MEAAIGQQVTEGLERSCKGEERVRSIHAAGRPGFEFMEARFFGDVFEPHRHDTYAIGLTLGGVQRFRYRGEERQSLPGDILVLHPDEEHDGGAGNEAALHYCMLYVPPDLLAPALTGRGRALPFVRDPVFHDPALRGKIRACFSEIESPDADGLLLDDLLVDVAEGLASHAGGLLPPPRSQPLRQVRAACAFMEAHLARNIHSTELEAITGIDRFALSRAFRAVLHTSPHRYFLMRRLDRARLLLRDGTPLAEAAAETGFADQAHFSRHFKKAYGLTPGRWNALLSRSQQ*