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SCNpilot_expt_1000_bf_scaffold_3492_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(8219..9409)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 397.0
  • Bit_score: 701
  • Evalue 4.90e-199
rnr; ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 397.0
  • Bit_score: 690
  • Evalue 3.30e-196
Ribonuclease R n=1 Tax=Rhizobium sp. CF142 RepID=J2KZD0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 397.0
  • Bit_score: 701
  • Evalue 3.50e-199

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGGTCTTTTCGCGGGACGGCCGCAAGCTCGGCCACACCTTCCATCGCATCATGATGAAGAGCGCCGCCAAGCTCTCCTACCAACAGGCGCAGGCCGCCATCGACGGCAATCCCGACGACAAGGCCGGACCGCTGCTGGAGCCGATCCTCAAGCCGCTGTGGCGGGCCTACGCGACGATGAAGCGCGGCCGCGACCGCCGCCAGCCGCTCGAACTCGACATGCCCGGGCGCAAGATCCTGCTGAAGCCTGATGGTACCGTCGACCGGGTCTTCGTGCCGCCGCGCCTCGACGCCCACAAGCTGATCGAGGAGATGATGATCCAGGCCAATGTCTGCGCCGCCGAGACGCTGGAGAAGAAGCGCCAGCCGCTGATCTACCGCATCCACGACGCGCCATCGCTCGCCAAGCAGGAGGGGCTTCGCGAGTTCCTGGCGACGCTCAGCATTCCGCTCGCCAAGGGCGGCAATGTGCGGGCCAATTCCTTCAACGGCATTCTTGCGAAAGCCGAAGGCACGCCGCAACAGACCATGGTCAACGAAATGGTGCTGCGCTCGCAAAGCCAGGCGATCTACAGCCCCGAGAATATCGGCCATTTCGGCCTCAACCTGATGAAATACGCCCATTTCACCTCGCCGATCCGCCGTTATGCCGACCTGATCGTGCATCGGGCGCTGGTGGGCTCGCTGGGGCTCGGCGAAGGCGGCATCACGCCGGACGAGGAAGGCACGCTGGACGACATCGCCGCCGAAATCTCAACCTTCGAGCGGCGCGCCATGGCGGCCGAGCGCGAGACGGTCGACCGGCTGATCGCCCATCACCTTTCCGGCCGGATCGGCCAGGAGTTCAGCGGCCAGGTGCGCGGCGTCACCAAGGCCGGGCTGTTCGTTTCGCTGCCGGAATTCGGGGCGGACGGCTTCGTTCCGGTCTCGACGCTGGGGCAGGATTACTTCATCTATGACGAGGCGCATCAGGCACTGACCGGCGAGCGCACCGGGCTCGGCTACCAGCTTGGCGACCGCGTGCAGGTGCGGCTGGTGGAAGCCGTGCCGCTGGCCGGCGCGCTGCGCTTCGAAATGCTGAGCGAGGGACGGAAGATGCCGACCGCCACGCGCTCGTTCCACAAGACGTCGCGGCGCGGGACGGCAAGGCCCCGCCAGCCGGGAACGCGCCCGCCACGCGGCCGGCGTTAA
PROTEIN sequence
Length: 397
MVFSRDGRKLGHTFHRIMMKSAAKLSYQQAQAAIDGNPDDKAGPLLEPILKPLWRAYATMKRGRDRRQPLELDMPGRKILLKPDGTVDRVFVPPRLDAHKLIEEMMIQANVCAAETLEKKRQPLIYRIHDAPSLAKQEGLREFLATLSIPLAKGGNVRANSFNGILAKAEGTPQQTMVNEMVLRSQSQAIYSPENIGHFGLNLMKYAHFTSPIRRYADLIVHRALVGSLGLGEGGITPDEEGTLDDIAAEISTFERRAMAAERETVDRLIAHHLSGRIGQEFSGQVRGVTKAGLFVSLPEFGADGFVPVSTLGQDYFIYDEAHQALTGERTGLGYQLGDRVQVRLVEAVPLAGALRFEMLSEGRKMPTATRSFHKTSRRGTARPRQPGTRPPRGRR*