name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3492_curated_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..419)
|
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K9Q9_RHIEC
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ABC90427.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_2
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(519..1790)
|
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000256|SAAS:SAAS00019792};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
dinP; DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HJD8_9RHIZ
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1880..2545)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MA84_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP24863.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
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SCNpilot_expt_1000_bf_scaffold_3492_curated_4
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2535..2825)
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDK9_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:KEA07225.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2972..3343
|
Two-component response regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDL0_AGRRK
celR1; two-component response regulator protein; K11443 two-component system, cell cycle response regulator DivK
Putative two-component response regulator {ECO:0000313|EMBL:GAJ91763.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
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SCNpilot_expt_1000_bf_scaffold_3492_curated_6
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(3325..3765)
|
Uncharacterized protein {ECO:0000313|EMBL:KIJ72663.1}; Flags: Fragment;; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4510..4749
|
Response regulator PleD {ECO:0000313|EMBL:EYR80736.1}; EC=2.7.7.65 {ECO:0000313|EMBL:EYR80736.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KN83_RHILT
pleD; response regulator PleD; K02488 two-component system, cell cycle response regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_8
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5516..5683)
|
50S ribosomal protein L33 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0C6_9RHIZ
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5778..6962)
|
MFS permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBV9_9RHIZ
MFS permease {ECO:0000313|EMBL:EKF58526.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
major facilitator superfamily protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_10
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7038..7739)
|
NTP pyrophosphohydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2JF70_9RHIZ
Hydrolase {ECO:0000313|EMBL:KGD99545.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_11
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7736..8191)
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDL4_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA07219.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_12
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8219..9409)
|
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
rnr; ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Rhizobium sp. CF142 RepID=J2KZD0_9RHIZ
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_13
unknown
|
Not on your lists |
comp(9623..10183)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_14
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10545..13226)
|
topA; Putative DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CAC45879.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
DNA topoisomerase 1 n=9 Tax=Rhizobium meliloti RepID=F7X2X3_SINMM
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13483..13704
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2J0J9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN47426.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_16
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13684..14835)
|
DNA protecting protein DprA n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F316_9RHIZ
DNA protecting protein DprA {ECO:0000313|EMBL:EHS52881.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
DNA protecting protein DprA; K04096 DNA processing protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_17
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14837..15454)
|
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL72_RHITR
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1
plsY; putative glycerol-3-phosphate acyltransferase PlsY
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_18
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15486..16775)
|
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Rhizobium giardinii RepID=UPI00036536CF
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_19
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16772..17218)
|
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
Aspartate carbamoyltransferase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F313_9RHIZ
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17872..19056
|
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BKL2_RHILV
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJC70567.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
acyl-CoA dehydrogenase protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_21
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19068..19514
|
acyl-CoA dehydrogenase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000363E68A
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EPE98893.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
aidB; acyl-CoA dehydrogenase; K09456 putative acyl-CoA dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_22
unknown
|
Not on your lists |
19674..19841
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_23
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19838..20164
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BZE5_9RHIZ
Membrane protein {ECO:0000313|EMBL:KGD99532.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20107..20595)
|
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Putative Holliday junction resolvase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHD6_RHITR
putative Holliday junction resolvase
|
|
SCNpilot_expt_1000_bf_scaffold_3492_curated_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20599..20895)
|
PhnA protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000363EF8B
PhnA protein {ECO:0000313|EMBL:KDR88853.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
phnA; Protein PhnA
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20982..21686
|
UPF0173 metal-dependent hydrolase H009_10121 n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8B4F6_RHIRD
metal-dependent hydrolase
UPF0173 metal-dependent hydrolase H009_10121 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_27
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21784..22071
|
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U001_9RHIZ
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22128..23609
|
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003752859
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23687..24205
|
acetyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037CEB2E
Acetyltransferase {ECO:0000313|EMBL:AHF83772.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
acetyltransferase
|
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SCNpilot_expt_1000_bf_scaffold_3492_curated_30
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24181..24519)
|
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L2L0_AGRSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY64226.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
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