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SCNpilot_expt_1000_bf_scaffold_3492_curated_31

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 24618..26120

Top 3 Functional Annotations

Value Algorithm Source
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 500.0
  • Bit_score: 934
  • Evalue 5.70e-269
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 500.0
  • Bit_score: 929
  • Evalue 5.40e-268
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=GATB_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 500.0
  • Bit_score: 929
  • Evalue 1.70e-267
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGAGCATTGTCGACGTCCGCACACCCGATCCGAAGCGCCTGATCCCCGGAGCCACCGGCGACTGGGAAATTGTCATCGGCATGGAAGTCCATGCGCAGGTGCTGAGCCAGTCCAAGCTGTTCTCCGGCGCCTCGACCGAATTCGGCAAGCCGGCCAATTCCAATGTCTCGCTGGTCGATGCCGCCATGCCCGGCATGCTGCCGGTCATCAACGCGGAATGCGTGGCGCAGGCCGTGCGCACCGGTCTCGGCCTGAAGGCGAAGATCAACAACCGCTCGATCTTCGACCGCAAGAATTATTTCTATCCCGACCTGCCGCAGGGCTATCAGATCTCGCAGTTCAAGGATCCGATCGTCGGCGAGGGCCAGATCGTCATCTCGCTCGGCCCCGACCGCCAGGGCAATTTCGAGGATATCGAAATCGGCATCGAACGCCTGCATCTGGAGCAGGACGCCGGCAAGTCGATGCACGACCAGCATCCGACCATGTCCTATGTCGATCTCAACCGCTCCGGCGTGGCGCTGATGGAAATCGTCTCCAAGCCGGACATGCGCTCGTCCGACGAGGCCAAGGCATACCTCACCAAGCTGCGCTCGATCGTCCGCTACCTCGGCACCTGCGACGGCAACATGGACGAAGGCTCGATGCGCGCCGACGTCAACGTCTCCGTGCGCCGTCCGGGCGGCGAGTTCGGCACGCGCTGCGAGATCAAGAACGTCAACTCGATCCGTTTCGTCGGCCAGGCCATCGAATACGAGGCGCGCCGCCAGATCGCCATCCTCGAAGACGGCGGTTCCATCGATCAGGAAACCCGCCTGTTCGATCCCGGCAAGGGCGAGACGCGCTCGATGCGCTCCAAGGAAGACGCGCACGACTATCGCTACTTCCCCGATCCGGACCTGCTGCCGCTGGAATTCGACGACGCCTTCGTCGAGTCGCTCAAGGCCGACCTGCCGGAACTGCCCGACGACAAGAAGGCCCGTTTCGTGCGCGATCTCGGCCTGTCGGTCTATGATGCCTCGGTTCTGGTCTCGGAAAAGGCGATTGCCGATTATTTCGAGGCCGTCGCCGCCGGCCGTGACGGCAAGACCGCCGCCAACTGGGTCATCAACGACCTGCTCGGCGCCTTGAACAGAACCGGCAAAAGCATTGAAGAAACGCCAGTTTCGCCGGCGCAGCTTGGGCAGATCATCGACCTCATCAAGGCCGAGACCATCTCCGGCAAGATCGCCAAGGATCTGTTCGAGATCGTGCTGGCCGAGGGCGGCGACCCCGCCGAAATCGTCGAAAGCCGTGGCATGAAGCAGGTGACCGACACCGGCGCCATCGAAAAGGCCGTGGACGACATCATCGCCGCCAACCCGGATCAGGTCGCCAAGGTGCAGGCAAAGCCGACGCTGGCCGGCTGGTTCGTCGGCCAGGTGATGAAGGCGACCGGCGGCAAGGCCAATCCGCAGGCCGTGCAGGCCTTGGTGAAGGCCAAGCTTGGTATCGAGGACTGA
PROTEIN sequence
Length: 501
MSIVDVRTPDPKRLIPGATGDWEIVIGMEVHAQVLSQSKLFSGASTEFGKPANSNVSLVDAAMPGMLPVINAECVAQAVRTGLGLKAKINNRSIFDRKNYFYPDLPQGYQISQFKDPIVGEGQIVISLGPDRQGNFEDIEIGIERLHLEQDAGKSMHDQHPTMSYVDLNRSGVALMEIVSKPDMRSSDEAKAYLTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGGEFGTRCEIKNVNSIRFVGQAIEYEARRQIAILEDGGSIDQETRLFDPGKGETRSMRSKEDAHDYRYFPDPDLLPLEFDDAFVESLKADLPELPDDKKARFVRDLGLSVYDASVLVSEKAIADYFEAVAAGRDGKTAANWVINDLLGALNRTGKSIEETPVSPAQLGQIIDLIKAETISGKIAKDLFEIVLAEGGDPAEIVESRGMKQVTDTGAIEKAVDDIIAANPDQVAKVQAKPTLAGWFVGQVMKATGGKANPQAVQALVKAKLGIED*