ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3492_curated_37

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(29119..29604)

Top 3 Functional Annotations

Value Algorithm Source
Biotin carboxylase {ECO:0000313|EMBL:EYR80769.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EYR80769.1};; EC=6.4.1.2 {ECO:0000313|EMBL:EYR80769.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 161.0
  • Bit_score: 310
  • Evalue 1.70e-81
Biotin carboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU14_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 161.0
  • Bit_score: 310
  • Evalue 1.20e-81
accC; acetyl-CoA carboxylase, biotin carboxylase similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 160.0
  • Bit_score: 307
  • Evalue 2.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGAACACCCGCTTGCAGGTGGAACACCCGATCACCGAGGCGATCACCGGCATCGACCTGGTGCATGAGCAGATCCGTGTCGCCTCAGGTGGAGGCTTGTCTGTGACCCAGGACGAGATTTCCTTCCATGGGCACGCCATCGAATGCCGCATCAATGCCGAGGATCCGCGCACCTTCGTGCCCTCGCCTGGGACGATCACGCATTTCCACGCACCGGGCGGCCTGGGCGTACGCGTCGATTCGGGCGCCTATCAGGGCTACAGAATCCCGCCCTATTACGACAGCCTGATCGGCAAGCTGATCGTCCACGGACGCACGCGCAACGAATGCATGATGCGCCTGCGCCGCGTGCTCGACGAATTCGTCATCGACGGCATCAAGACGACGCTGCCGCTGTTCCAGGATCTGATTTCCAACCCGGATATCGCCAATGGCGACTATGATATCCACTGGCTGGAAAATTATCTCGGCGGAAAGGCCAACTAA
PROTEIN sequence
Length: 162
MNTRLQVEHPITEAITGIDLVHEQIRVASGGGLSVTQDEISFHGHAIECRINAEDPRTFVPSPGTITHFHAPGGLGVRVDSGAYQGYRIPPYYDSLIGKLIVHGRTRNECMMRLRRVLDEFVIDGIKTTLPLFQDLISNPDIANGDYDIHWLENYLGGKAN*