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SCNpilot_expt_1000_bf_scaffold_4624_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 2550..3236

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase subunit gamma n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HF38_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 227.0
  • Bit_score: 367
  • Evalue 9.00e-99
Formate dehydrogenase {ECO:0000313|EMBL:KGD87298.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 228.0
  • Bit_score: 371
  • Evalue 8.80e-100
fdoI; formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 228.0
  • Bit_score: 359
  • Evalue 7.70e-97

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGTCCATCTCCAAGGATGTGCTGCCCGGCGATGCGATCCACCGCGGCCCGCCGGTGACGGTGAACCGCTACGGCCCGGCCAAGCGGATCAACCACTGGATCACGGCCACTTGCCTGATCCTGCTGCTCCTGTCGGGGCTCGCTTTGTTCCATCCCTCGCTGTTCTTCCTGACCGGTCTGTTCGGCGGCGGGCAGAATACGCGCATGCTGCATCCCTGGATCGGCGTCGTGCTGTTCGTCAGCTTCTTCATCCTGTTCGCGCAGCTCTGGCGGGCGAACCTGCCCAATCGCGTCGATGTGCAATGGGTGTCGCAGATAAACGACGTCGTCGCCGGGCATGAGGAAAAGCTGCCGGAGATCGGCAAATACAATGCCGGCCAGAAATTCATCTTCTGGGGCATGGCCTTCTTCATCATCGTGCTGATCGGCAGCGGATTGATGATCTGGGACCAGTATTTCGGCGAATCGACGCCGATTCTGCTTCGCCGCATCGCCGTTCTCGTGCATTCGGTCTCGGCTGTGCTGATCATCATGCTGTTCATCCTGCATGTCTACGCAGCGATCTGGACGCGCGGCACGCTGAGCGCCATGACGCGCGGCACGGTGACCGGCGGCTGGGCCTGGCGGCATCATCGCAAATGGCTGAAAGAGCTGGCTGGACGCGGCCGGATCGATCCGGCAGAATAA
PROTEIN sequence
Length: 229
MSISKDVLPGDAIHRGPPVTVNRYGPAKRINHWITATCLILLLLSGLALFHPSLFFLTGLFGGGQNTRMLHPWIGVVLFVSFFILFAQLWRANLPNRVDVQWVSQINDVVAGHEEKLPEIGKYNAGQKFIFWGMAFFIIVLIGSGLMIWDQYFGESTPILLRRIAVLVHSVSAVLIIMLFILHVYAAIWTRGTLSAMTRGTVTGGWAWRHHRKWLKELAGRGRIDPAE*