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SCNpilot_expt_1000_bf_scaffold_4624_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 13557..14159

Top 3 Functional Annotations

Value Algorithm Source
nuoC1; NADH dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 200.0
  • Bit_score: 375
  • Evalue 9.20e-102
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 200.0
  • Bit_score: 375
  • Evalue 4.10e-101
NADH-quinone oxidoreductase subunit C n=2 Tax=Rhizobium/Agrobacterium group RepID=NUOC_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 200.0
  • Bit_score: 375
  • Evalue 2.90e-101
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGAGCGAAGCCTTGAACGAGCTTGCTACCTACCTCGCGGAGACCCGCGGCGCGCTGATCGCGGGTTCAGAGATCCGTTACGGCGAACTGACGCTGGCGGCGACCGGCGAGAACCTAATCGCGCTTCTGACCTTCCTGCGTGACGATGCCCGCTGCGGCTTTGTCAACATGGTCGATATCTGTGGCGTCGACTGGCCGCAGCGCCCCGAGCGTTTCGATGTGGTTTATCACCTCCTGTCACCGAAACAGAACCTGCGCATCCGCATCAAGGTGGCGACTTCGGAAGACGGGCCGGTGCCCTCGGCGACTGCAGTCTATCCGGGCGCCGACTGGTTCGAGCGCGAAGCCTGGGACATGTACGGCATCCTGTTCACCGGCCATCCGGATCTGCGCCGCATTCTCACGGATTACGGTTTCGAGGGCCATCCGCTGCGCAAGGACTTTCCGACGACCGGTTTCGTCGAGGTTCGCTACGACGACGCCCAGAAGCGCGTGGTCTATGAGCCTGTCGAGCTGAAGCAGGAATTCCGCAACTTCGACTTCCTAAGCCCCTGGGAAGGCACGGACTACGTGCTGCCGGGCGACGAGAAGGCGAAGGCCTGA
PROTEIN sequence
Length: 201
MSEALNELATYLAETRGALIAGSEIRYGELTLAATGENLIALLTFLRDDARCGFVNMVDICGVDWPQRPERFDVVYHLLSPKQNLRIRIKVATSEDGPVPSATAVYPGADWFEREAWDMYGILFTGHPDLRRILTDYGFEGHPLRKDFPTTGFVEVRYDDAQKRVVYEPVELKQEFRNFDFLSPWEGTDYVLPGDEKAKA*