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SCNpilot_expt_1000_bf_scaffold_3918_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 613..1146

Top 3 Functional Annotations

Value Algorithm Source
Ribulokinase 2 {ECO:0000313|EMBL:EYR78692.1}; EC=2.7.1.16 {ECO:0000313|EMBL:EYR78692.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 176.0
  • Bit_score: 294
  • Evalue 1.10e-76
pentulose kinase (EC:2.7.1.47); K00875 D-ribulokinase [EC:2.7.1.47] similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 177.0
  • Bit_score: 248
  • Evalue 1.10e-63
Ribulokinase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHN0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 176.0
  • Bit_score: 294
  • Evalue 7.60e-77

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGAAAAAGCCGGCGGATTCTCCGAGGCAGCAAGGCTCGCGGATGGCTTGCATATCGTGCCGGAATTCCTCGGCAACCGCGCGCCCTTTGCCGACCCGCATGCCCGCGCGGCCATCGTCGGCCTCGGCATGGAACGGGATATCGGCAATCTCGTCGCCCTCTACATCGCCGGCCTTTGCGGCATCGGTTACGGCCTGCGCCAGATCATCGATGTGCAGGCGGCCGCCGGCGCGCCGATCGACAGGATCGTGATCAGCGGCGGCGCCGGCCAGCTCGATCTCGTGCGCCAGCTTCTCGCCGATGCCACGGGCAAGCCGCTTCTCGCCACCCGGTCGGAGGAGCCGGTGCTGCTCGGGGCCGCCATTCTCGGCAGCGTCGCCGGCGGGGTTTTCCCGGATATGCGCGCCGCCATGGCCGCCCTGTCCGCGACCGATCGCACATACCGGCCCGCCGGCAGCGAAACCGCCGCCCTGCATGCCAAACGGTATGATGCCTTCCAGCGGCTACAGACCCTGGCCCGCGAAATCCGCTAG
PROTEIN sequence
Length: 178
VEKAGGFSEAARLADGLHIVPEFLGNRAPFADPHARAAIVGLGMERDIGNLVALYIAGLCGIGYGLRQIIDVQAAAGAPIDRIVISGGAGQLDLVRQLLADATGKPLLATRSEEPVLLGAAILGSVAGGVFPDMRAAMAALSATDRTYRPAGSETAALHAKRYDAFQRLQTLAREIR*