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SCNpilot_expt_1000_bf_scaffold_3918_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3918_curated_1
unknown

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comp(1..318)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3918_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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613..1146
DNA (534bp) protein (178aa)
Ribulokinase 2 {ECO:0000313|EMBL:EYR78692.1}; EC=2.7.1.16 {ECO:0000313|EMBL:EYR78692.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pentulose kinase (EC:2.7.1.47); K00875 D-ribulokinase [EC:2.7.1.47]
Ribulokinase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHN0_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3918_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1536..2387
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4D7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81666.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
poly(aspartic acid) hydrolase
SCNpilot_expt_1000_bf_scaffold_3918_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2421..3965
DNA (1545bp) protein (515aa)
Extracellular solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8Q8_9RHIZ
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:EYR81665.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC superfamily ATP binding cassette transporter substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_3918_curated_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4067..4804)
DNA (738bp) protein (246aa)
UPI0003CF9FF8 related cluster n=1 Tax=unknown RepID=UPI0003CF9FF8
Uncharacterized protein {ECO:0000313|EMBL:ESZ21668.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
MOSC domain-containing protein; K07140
SCNpilot_expt_1000_bf_scaffold_3918_curated_6
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4808..5677)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BVE1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM73543.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
poly(aspartic acid) hydrolase
SCNpilot_expt_1000_bf_scaffold_3918_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5674..7245)
DNA (1572bp) protein (524aa)
molybdate-transporting ATPase (EC:3.6.3.24 3.6.3.29); K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
ABC-type uncharacterized transport system, duplicated ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J2IU74_9RHIZ
ABC-type transport system, duplicated ATPase component {ECO:0000313|EMBL:EYR81667.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_3918_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7337..8101)
DNA (765bp) protein (255aa)
Dipeptide transport system permease protein DppC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL83_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR81668.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2
Displaying 8 items

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