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SCNpilot_expt_1000_bf_scaffold_1367_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 6999..7682

Top 3 Functional Annotations

Value Algorithm Source
Two component response regulator n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUD9_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 227.0
  • Bit_score: 410
  • Evalue 9.30e-112
Response regulator protein {ECO:0000313|EMBL:AJD43184.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 227.0
  • Bit_score: 411
  • Evalue 5.80e-112
mtrA; two component response regulator similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 227.0
  • Bit_score: 410
  • Evalue 2.90e-112

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACGGCCCGGACGATTCTGGTGGTGGACGACGATGCGGACCTGCGGGAGACCCTGGTCGAGCAACTGGCGCTCTATGACGAATTCAACGTGTTGCAGGAATCCAGCGCCGTGCAGGGCATGCAGGCGGCGCGCAACGGCGCCGTCGATCTGCTGATCATGGATGTCGGCCTGCCCGACATGGACGGTCGCGAAGCGGTGAAAATGCTGCGCAAGAACGGCTTCAAGGCGCCGATCGTCATGCTGACCGGCCACGACACCGATTCCGACACCATCCTCGGTCTGGAAGCCGGCGCAAACGACTATGTCACAAAGCCCTTCCGTTTCGCGGTGCTGCTCGCCCGCATCCGCGCCCAGCTTCGCCAGCACGAGCAGAGCGAGGACGCCACCTTCACGGTTGGCCCCTATCTGTTCAAGCCGAGCCAGAAACTGCTGAGCACCGAGGACGGCCAGAAAATCCGGCTGACGGAAAAGGAGGCGGCGATCATCCGCTATCTCTACCGCGCCGACCAGAAGGTCGTGACCCGCGACGTGCTGCTGGAAGAGGTTTGGGGCTACAATTCCGGCGTGACAACCCATACGCTGGAGACCCATGTCTACCGCCTGCGCCAGAAGATCGAGCGCGATCCGTCGAACGCCGAGATTCTGGTGACGGAGAACGGCGGCTATAAAATCGTTCCGTAA
PROTEIN sequence
Length: 228
MTARTILVVDDDADLRETLVEQLALYDEFNVLQESSAVQGMQAARNGAVDLLIMDVGLPDMDGREAVKMLRKNGFKAPIVMLTGHDTDSDTILGLEAGANDYVTKPFRFAVLLARIRAQLRQHEQSEDATFTVGPYLFKPSQKLLSTEDGQKIRLTEKEAAIIRYLYRADQKVVTRDVLLEEVWGYNSGVTTHTLETHVYRLRQKIERDPSNAEILVTENGGYKIVP*