ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1367_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(17986..18945)

Top 3 Functional Annotations

Value Algorithm Source
Thioredoxin n=1 Tax=Rhizobium sp. CF142 RepID=J1SZ13_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 323.0
  • Bit_score: 487
  • Evalue 1.40e-134
Thioredoxin {ECO:0000313|EMBL:EJJ30503.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 323.0
  • Bit_score: 487
  • Evalue 2.00e-134
trxA2; thioredoxin protein; K05838 putative thioredoxin similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 324.0
  • Bit_score: 484
  • Evalue 2.20e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGAGCGGCATGAACGATTCCTATAGCGGTTCCTTCGGCAACCAGATGAGCGCCTCGGTGACAACAGGCGCAGGCGCGGCGGGCGGCCACATCAAGGACACGACCACGGCGCAGTTCACGAAGGACGTGCTGGAGGAATCGCGCCACCAGCCGGTGCTGGTCGATTTCTGGGCGCCCTGGTGTGGGCCTTGCAAGCAGTTGCCCCCCGTCATCGAGAAGGTGGTCAACGAGGCGGGCGGGCGCGTCAAGCTGGTCAAGCTCAACATCGACGACCATCCGGCCATTCCCGGCCAACTCGGCATCCAGTCAATTCCTGCCGTCATCGCCTTCGTCAACGGCCGTCCCGCCGATGGTTTCATGGGCGCAGTGCCGGAGACCCAGATCCGCCAATTCATCGACCGCATCGCCGGCCCCGCCGCCGACGATCCGGCCGTGCAGATCGCCGCGATCCTCGAAGAAGCCGATGCCGCCTTCGCGCAAGGCGATATCGATGCCGCCGGCGAGCTCTACAGCGCCATCCTGCAGGCCGACCCCGAAAACGCCAGGGCTGTCGCCGGCATTGCCGAATGCCTGATGGCTGGCGAGCAGCCGGAGCGGGTGCGCGAATTCCTGGCCACGCTTCCGGAGACGCTGCTGGCCGATGCCGCACTTCAGCCCGTCATCAAGAAGCTCGAACAGATCGAGGAAGCCCGCAAGCTCGGCGACCCCGTGGCGCTGGAGCATGAGCTGGCGCTCAACCCCGATCACCACGAGGCGCGCATCAAGCTCGCCAAGATCCGCAATGTCGAGGGAAGGCGCGACGAGGCGGCCGATCACCTGCTGTACGTCATGAAGCGCGACCGCGCCTTCGACGACGACGGCGCCCGCCGCCAGCTGCTGCAATTCTTCGACGTCTGGGGTTTCAAGGATCCGGCGACGATTGCGGCGCGGCGCAAGCTGTCCTCCATCCTGTTTTCCTGA
PROTEIN sequence
Length: 320
MSGMNDSYSGSFGNQMSASVTTGAGAAGGHIKDTTTAQFTKDVLEESRHQPVLVDFWAPWCGPCKQLPPVIEKVVNEAGGRVKLVKLNIDDHPAIPGQLGIQSIPAVIAFVNGRPADGFMGAVPETQIRQFIDRIAGPAADDPAVQIAAILEEADAAFAQGDIDAAGELYSAILQADPENARAVAGIAECLMAGEQPERVREFLATLPETLLADAALQPVIKKLEQIEEARKLGDPVALEHELALNPDHHEARIKLAKIRNVEGRRDEAADHLLYVMKRDRAFDDDGARRQLLQFFDVWGFKDPATIAARRKLSSILFS*