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SCNpilot_expt_1000_bf_scaffold_2382_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(539..997)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF4F66 related cluster n=1 Tax=unknown RepID=UPI0003CF4F66 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 150.0
  • Bit_score: 252
  • Evalue 3.70e-64
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:GAK69925.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 152.0
  • Bit_score: 280
  • Evalue 1.40e-72
6-phosphogluconate dehydrogenase, decarboxylating similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 150.0
  • Bit_score: 251
  • Evalue 1.50e-64

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGGTCCATAACGGCATCGAATACGGCATGATGGCAGCCTATGCCGAAGGCATGAGCATCCTGAAGGCCGCCAATGCGGGCAACAGGCCGCGTGACGCGGATGCGGAAACCAGCCCGCTGCCAACCCCGCAATATTACAGGTTCGACATCGACCTGGCGGCGGTATCGGAAGTCTGGCGGCACGGCAGCGTCATCAGTTCCTGGCTTCTCGACCTGACGGCGGATGCCCTGAAGCAGGATCCGGCGCTTTCGGCCTATGGCGGGCGCGTTTCCGATTCCGGCGAAGGGCGCTGGACGCTGAAGGCGGCGATCGATACCGGTACGCCCGCGCCCGTCCTGTCCTCGGCGCTGTTCCAGCGCTTCAATTCGCAGGGCGAATCCCTCTACGCCGACAAGCTCCTGTCGGCCATGCGCTTTGCCTTCGGCGGCCATCATGAAAAGCCCGGGGGCGACGCCTGA
PROTEIN sequence
Length: 153
MVHNGIEYGMMAAYAEGMSILKAANAGNRPRDADAETSPLPTPQYYRFDIDLAAVSEVWRHGSVISSWLLDLTADALKQDPALSAYGGRVSDSGEGRWTLKAAIDTGTPAPVLSSALFQRFNSQGESLYADKLLSAMRFAFGGHHEKPGGDA*