ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2382_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(10964..11674)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3AEA6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 233.0
  • Bit_score: 321
  • Evalue 5.90e-85
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:EYD73542.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 234.0
  • Bit_score: 324
  • Evalue 9.80e-86
livF2; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 233.0
  • Bit_score: 316
  • Evalue 6.00e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubellimicrobium mesophilum → Rubellimicrobium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGCTATCTGAAGGCGGAGGCGCTCGTGGGCGGCTATGGCGGCGCGATGATCCTCAACAGCTGCACCATCGCGGTGGACCGTGGGCGGATCGCGGTCATCGTCGGTCCGAACGGGGCGGGAAAGTCCACCGCAATGAAGGCGATACTGGGGCTGCTCCGGCTGACATCGGGCCGGGTCTTGCTGGACGGGCGCGACATCACGGCCCTGCCGACCCAGGCGCGCATCAGCGCCGGCATGGCCTTCGTGCCGCAGACGGACAATGTCTTTCCCTCCCTCAGCGTGTTCGAAAACCTTCAGATGGGAGCGCTGCTGCGCAGGGATCCGATCGGGGAGACGCTGGAGGAGATATTTGCCCTCTTCCCGATCCTCGCCGAGAAAAGACACCAGCTCGCCGGCCAGCTTTCCGGCGGCCAGCGCCAGCAGCTTGCCGTCGGGCGGGCCCTCATGACGCGTCCTTCCGTCCTCCTGCTCGACGAACCCACGGCCGGGGTGAGCCCGAACGTGATGGACGAGCTTTTCGACAGGATCACCCGCATCGCCGCCCAGGGCCTTGCCGTTGTGATGGTGGAGCAGAACGCGGCTGGTGCCCTGGAAATCGCCGATACGGGTTTCGTGCTGGTGCAGGGCGCGAACCGCTTTACCGGGGCCGGGCGGGATCTGCTGAACGATCCCGACATCCGCCGCAGCTTTCTGGGTGGACGCAAATGA
PROTEIN sequence
Length: 237
MSYLKAEALVGGYGGAMILNSCTIAVDRGRIAVIVGPNGAGKSTAMKAILGLLRLTSGRVLLDGRDITALPTQARISAGMAFVPQTDNVFPSLSVFENLQMGALLRRDPIGETLEEIFALFPILAEKRHQLAGQLSGGQRQQLAVGRALMTRPSVLLLDEPTAGVSPNVMDELFDRITRIAAQGLAVVMVEQNAAGALEIADTGFVLVQGANRFTGAGRDLLNDPDIRRSFLGGRK*