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SCNpilot_expt_1000_bf_scaffold_2382_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(12538..13728)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Citreicella sp. SE45 RepID=D0D225_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 392.0
  • Bit_score: 484
  • Evalue 1.10e-133
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EEX14063.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 392.0
  • Bit_score: 484
  • Evalue 1.60e-133
putative periplasmic ligand-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 395.0
  • Bit_score: 458
  • Evalue 2.80e-126

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Taxonomy

Citreicella sp. SE45 → Citreicella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1191
ATGACATCAATTCTCAGGGCGCTTTTGCTGGGATCCGCCGTCGCGGCGGCTGCACCGGCCATGGCCGAAAACCTCAAGATCGGCATTCTTTTCGGCTTCACCGGGCCGATCGAGTCACTCACGCCGCCGATGGCGGACGGTGCCGAGCTGGCGATGAAGGAGGTGTCCGACAGCCATCTCCTGCGCGGCGGCGACACCGTCACGGCGGTGCGCGGCGACAGCACCTGCACCGATGCGTCGGCGGCAACGGCCGCCGCGGAACGGCTGGTGACGGTCGACAAGATCGTGGCGCTTGTCGGGGCCGACTGCTCGGGCGTCACCACCGCCGTGCTGAACAATGTGGCGGTCCCGAACAATCTTCTGATGATTTCGCCGTCCGCGACATCTCCGGCGCTTGCGGCCGACACCGACAGGGGCCTGTTCTTCCGGACCGCGCCTTCGGATGCGCGCCAGGGCGAACTGCTGTCCAAGGTGCTGATCGATCGCGGCATCAAGACCGCGGCCGTGACCTATACCAACAACGACTACGGCAAGGGCTTCGCCGATTCTTTCGTCGCCGCCTACAAGGCGGCGGGCGGCAAGGCGACGCTGGTTATCCCGCATGAGGACGGCAAGGCGGACTACTCCGCGGAGGTCTCGGCGTTGTCGGTTGCCGGCGGCGAAACGCTGGTGGTTCTGGGCTATGCCGACCAGGGCGGCCACGGCATCATCAAGGCGTCGCTCGACAGCGGCGCATTCGACAGCTTCGCCGTCGGTGACGGCATGCATTCCGAAAAGCTGACCGCCGATTTCGGCCCCGGCCTGAAGATCTTCGGCACCGTGCCATGGACGGTGGGCGACGGCGCCACGAAGTTCGCGGCCTTGGCCAAAGCCGCCGGAAAGAAAGCCGACAGCTCCTTCGTGCGCGAATCCTATGACGCGGCGGCGCTGATCCTGCTGGCCATCCAGAAGGCCGGCGACCCGGCCAAGGCGGCACAGCACGTCATGGACGTCGCCAATGGTCCCGGCGAGAAGATCTATCCCGGCGAACTGGCCAAGGCGCTCAAGATTCTCAAGGACGGCGGCAACGTCGATTATGTCGGCGCCTCCGACGTGCAGATGATCGGCACCGGCGAAAGCGCCGGCAGCTACCGCGAATTCGAAAACAAGGGCGGCAAGTTCGAAACCGTGCGCATGCTGACGGCCGAATAA
PROTEIN sequence
Length: 397
MTSILRALLLGSAVAAAAPAMAENLKIGILFGFTGPIESLTPPMADGAELAMKEVSDSHLLRGGDTVTAVRGDSTCTDASAATAAAERLVTVDKIVALVGADCSGVTTAVLNNVAVPNNLLMISPSATSPALAADTDRGLFFRTAPSDARQGELLSKVLIDRGIKTAAVTYTNNDYGKGFADSFVAAYKAAGGKATLVIPHEDGKADYSAEVSALSVAGGETLVVLGYADQGGHGIIKASLDSGAFDSFAVGDGMHSEKLTADFGPGLKIFGTVPWTVGDGATKFAALAKAAGKKADSSFVRESYDAAALILLAIQKAGDPAKAAQHVMDVANGPGEKIYPGELAKALKILKDGGNVDYVGASDVQMIGTGESAGSYREFENKGGKFETVRMLTAE*