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SCNpilot_expt_1000_bf_scaffold_1483_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(8755..9312)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Rhizobium leguminosarum RepID=C6AUF3_RHILS similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 341
  • Evalue 7.40e-91
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 341
  • Evalue 2.30e-91
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 185.0
  • Bit_score: 341
  • Evalue 1.00e-90

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGACGACAATTCGCAACCGAGCTTCAAGCGCGAGATGCTGGCCGCCCTTCCAAGCCTGCGTGCCTTCGCCATATCGCTCATTGGCCGGCACGACCGCGCCGACGATCTCGTCCAGGACACGATCATGAAGGCCTGGGCGAAGCAGGATCATTATCAGATGGGCACCAACATGAAGGCCTGGCTGTTCACGATCCTGCGCAACGAGCTGTTCAGCCAGATGCGCAAGCATGGCCGCGAGGTGCAGGACAGCGACGGCGTCTTCACCGAATCCATGGCGACCCATCCCTCCCAATACGGTTCGATGGATCTGCAGGATTTTCGCCGCGCGCTGGAAAAGCTTCCTCCGGACCAGCGTGAAGCCATCATCCTCGTCGGCGCTTCCGGCTTCTCCTATGAAGAGGCGGCTGAAATCTGCGGTTGTGCCGTCGGCACGATCAAGAGCCGCGTCAACCGCGCGCGCCTGCGCCTGCAGGAAATGCTCCAGGTGAGCGGCGAGGGCGACTATGGCCCCGATGCGACCTCCGCCCCCCTGACCTCCAAGGCCTTCGCCTTCTAA
PROTEIN sequence
Length: 186
MDDNSQPSFKREMLAALPSLRAFAISLIGRHDRADDLVQDTIMKAWAKQDHYQMGTNMKAWLFTILRNELFSQMRKHGREVQDSDGVFTESMATHPSQYGSMDLQDFRRALEKLPPDQREAIILVGASGFSYEEAAEICGCAVGTIKSRVNRARLRLQEMLQVSGEGDYGPDATSAPLTSKAFAF*