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SCNpilot_expt_1000_bf_scaffold_1483_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 21753..22544

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY43_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 259.0
  • Bit_score: 462
  • Evalue 4.10e-127
ABC transporter-like protein {ECO:0000313|EMBL:EYR80901.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 259.0
  • Bit_score: 462
  • Evalue 5.70e-127
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 263.0
  • Bit_score: 457
  • Evalue 3.10e-126

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGCCACTATCCAATGAAACCGTCGTGCGCGCCGAGGAGCTGGGGCTCACTTTCCAGACCAATGACGGGCCGGTGACGGCGCTGACCGGCGTCTCGCTCGACATCCGCAAGGGCGATTTCGTCTCGTTCATCGGCCCCTCCGGCTGCGGCAAGACGACCTTCCTGCGCATCATCGCCGATCTCGAACAGCCGACCGCCGGCCGCATCTCCGTCAACGGCATGACGCCGGAACAGGCGCGCAAGGCACGCGCCTACGGTTATGTCTTCCAGGCCGCAGCCCTTTATCCCTGGCGCACCATCGAGAAGAACATCGCTCTGCCGCTGGAGATCATGGGTTTTTCCAGCGCCGAGAAGAAAGAGCGCATCGAACGGACGCTGGCGCTGGTCAACCTTTCCGGCTTCGGCAAGAAATATCCGTGGCAGCTTTCCGGCGGCATGCAGCAGCGCGCCTCCATCGCCCGCGCGCTCGCCTTCGATGCCGACCTGCTGTTGATGGACGAACCCTTCGGCGCGCTCGACGAAATCGTCCGTGACCATCTCAACGAGCAACTGCTGAAACTCTGGGCGGCGACCCGGAAGACCATCTGTTTCGTCACCCACTCGATTCCCGAGGCCGTCTATCTCTCGACCAGGATCGTCGTCATGTCGCCGCGCCCGGGGCGGGTGACGGATGTGATCGAATCCACACTGCCCAAGGAGCGGCCGCTCGGCATCCGCGACACGCCGGAATTCCTGGAAATCGCCCATCGCGTCCGCGAAGGCCTGCATGCGGGGCATATCCATGAGGATTGA
PROTEIN sequence
Length: 264
MPLSNETVVRAEELGLTFQTNDGPVTALTGVSLDIRKGDFVSFIGPSGCGKTTFLRIIADLEQPTAGRISVNGMTPEQARKARAYGYVFQAAALYPWRTIEKNIALPLEIMGFSSAEKKERIERTLALVNLSGFGKKYPWQLSGGMQQRASIARALAFDADLLLMDEPFGALDEIVRDHLNEQLLKLWAATRKTICFVTHSIPEAVYLSTRIVVMSPRPGRVTDVIESTLPKERPLGIRDTPEFLEIAHRVREGLHAGHIHED*