ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2766_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 11962..12630

Top 3 Functional Annotations

Value Algorithm Source
methionine ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036E5E2F similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 222.0
  • Bit_score: 399
  • Evalue 2.70e-108
D-methionine ABC transporter permease protein {ECO:0000313|EMBL:GAK68713.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 222.0
  • Bit_score: 369
  • Evalue 4.20e-99
binding-protein-dependent transport system inner membrane protein; K02072 D-methionine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 222.0
  • Bit_score: 366
  • Evalue 6.20e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGTCGCCTGAGATGCTGTTCGACCTGCTCTGGAAGTCGTTGCTGCAGACGCTGCACATGGTCGCCGTGTCGGGCCTGGTCGGCTCGCTGGTCGGCCTGCCGATCGGCATCTTCCTGGCCACCAGCGGCCGCAACGAGCTGTTTCCCGCCCCGGCGCTGAACCGCGCGGTCGGGCTCGTCGTCAATGCGGCGCGCTCGACGCCGTTCATCATCCTCGTCGTGGCGATCATCCCGCTGACCCGCCTTTTGACCGGCACGTCGATCGGCACCAGCGCCGCTATCGTGCCGCTGACCATCGCCACAGTGCCCTTCTTCGCGCGCCTGGTGGAGGCGGCGATCCGGGATGTCGACAAGGGGCTGATCGAGGCCGCCCGCGCCATGGGCGCAACGCCGATGCAGATCGTCTTCAAGGTATTGCTTGCCGAGGCGCGGCCGGCAATCCTGCTTGCCTTCACCATGACCATCGTCAGCCTGATCGGCTATTCGGCCATGGTCGGCGCGGTCGGCGGCGGCGGTCTCGGCGATCTCGGCATTCGCTACGGCTACCAGCGCTTCATGCCCGAGGTGATGCTGGCGGTCGTCGTCGTGCTGATCGTGCTTGTGCAACTGGTGCAGAGCGCCGGCGACGCGCTGGCGCGGCGCTTCGACAAGCGCAACCGCAAGAGCTGA
PROTEIN sequence
Length: 223
MSPEMLFDLLWKSLLQTLHMVAVSGLVGSLVGLPIGIFLATSGRNELFPAPALNRAVGLVVNAARSTPFIILVVAIIPLTRLLTGTSIGTSAAIVPLTIATVPFFARLVEAAIRDVDKGLIEAARAMGATPMQIVFKVLLAEARPAILLAFTMTIVSLIGYSAMVGAVGGGGLGDLGIRYGYQRFMPEVMLAVVVVLIVLVQLVQSAGDALARRFDKRNRKS*