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SCNpilot_expt_1000_bf_scaffold_3260_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 12186..12956

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 256.0
  • Bit_score: 445
  • Evalue 4.10e-122
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 255.0
  • Bit_score: 436
  • Evalue 5.60e-120
Triosephosphate isomerase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HIZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 256.0
  • Bit_score: 445
  • Evalue 2.90e-122

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGACACCTGACGTGCGTCCGCTGGTGGCGGGAAACTGGAAGATGAACGGCACCCGCGACTCGCTGGACCAGATCAAGGCGATTGCGGCCGGCGTCAGCGGTCCGATGGCCGCCAGGGTCGAGGCGCTGATCTGCCCGCCCTCGACGCTGCTCTATGTCGCGACCGCGCTCTGCACAGACAGCCCGCTGGCCATCGGCGCGCAGGATTGCCACCAGAACGTCTCCGGCGCCCATACCGGCGATATTTCCGCCGCCATGATCGCCGATTGCTTCGGCACCTATGTCATCGTCGGCCATTCCGAGCGCCGCACCGACCATGCCGAGACCGACCATCTGGTACGCGCCAAGGCCGAAGCCGCCCATGATGCCGATCTCACCGCCATCGTCTGCATCGGCGAGACGGCGGACGAGCGCAAGAACGGACAGACGCTGGATATCCTCAAGCGCCAGCTTGCTGGTTCGGTGCCGGACGGTGCGACGGCGGAAAACACCGTCATCGCGTATGAGCCGGTCTGGGCGATCGGCACCGGCCTGACGCCGACGGCGGCGGATGTCGAGGAGGCCCATGCCTTCATGCGCGCCGAGCTGGTCGCCCGTTTCGGCGCCGCCGGCAAGGTGATGCGCATTCTTTACGGCGGCTCGGTCAAGCCTTCCAACGCGGTCGAGCTGATGGGCATTGCCAATGTCGACGGCGCGCTGGTCGGCGGCGCCAGCTTGAAAGCGGCGGATTTCCTCGCCATTTATGGTGCGTATAAAGAATTGCTGGATTGA
PROTEIN sequence
Length: 257
MTPDVRPLVAGNWKMNGTRDSLDQIKAIAAGVSGPMAARVEALICPPSTLLYVATALCTDSPLAIGAQDCHQNVSGAHTGDISAAMIADCFGTYVIVGHSERRTDHAETDHLVRAKAEAAHDADLTAIVCIGETADERKNGQTLDILKRQLAGSVPDGATAENTVIAYEPVWAIGTGLTPTAADVEEAHAFMRAELVARFGAAGKVMRILYGGSVKPSNAVELMGIANVDGALVGGASLKAADFLAIYGAYKELLD*