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SCNpilot_expt_1000_bf_scaffold_1951_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(16683..17075)

Top 3 Functional Annotations

Value Algorithm Source
cdd; cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 130.0
  • Bit_score: 239
  • Evalue 6.70e-61
Cytidine deaminase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HMY7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 128.0
  • Bit_score: 240
  • Evalue 1.20e-60
Cytidine deaminase {ECO:0000313|EMBL:GAJ94367.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 130.0
  • Bit_score: 241
  • Evalue 6.00e-61

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGTCGCAGGAACTGTTCGAGGCCGCGCGCGGCGCCATGGCGTTTGCCCATGCGCCCTATTCGAAATTCCCGGTCGGCGCGGCGATCCGCGCCGAGGACGGGAAAATCTATGCCGGCGCCAACATCGAGAACCTCTCCTTCCCGCAAGGCTGGTGCGCGGAGCCGACGGCGATCAGCGCCATGATCATGGGCGGAGCGAAGAAGATCGTCGAAATGGCCGTCATCGCCGAAAAGCTGGCGGAATGCCCGCCCTGCGGCGGCTGCCGCCAGAAGATCGCCGAATTCGCCAGCGCCGATACCCGCATCTATCTCTGCAACGAGGTTGGCGTCAGCAAGACGATGACCATGGAGGAACTGCTGCCCTTCAGCTTCAAGACGGAGATACTCGGATGA
PROTEIN sequence
Length: 131
MSQELFEAARGAMAFAHAPYSKFPVGAAIRAEDGKIYAGANIENLSFPQGWCAEPTAISAMIMGGAKKIVEMAVIAEKLAECPPCGGCRQKIAEFASADTRIYLCNEVGVSKTMTMEELLPFSFKTEILG*