ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2828_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4785..7235)

Top 3 Functional Annotations

Value Algorithm Source
Aminomethyltransferase GcvT {ECO:0000313|EMBL:EYR82120.1}; EC=2.1.2.10 {ECO:0000313|EMBL:EYR82120.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 814.0
  • Bit_score: 1490
  • Evalue 0.0
Aminomethyltransferase GcvT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D397_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 814.0
  • Bit_score: 1490
  • Evalue 0.0
FAD dependent oxidoreductase/aminomethyl transferase similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 815.0
  • Bit_score: 1469
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2451
ATGAAGGCTATTCCCAACAAGGCAAGGGCCGTCATCATCGGCGGCGGCGTATCGGGCTGTTCGGTGGTCTATCATCTGGCCAAGCTCGGCTGGACCGACGTGGTGCTCTTGGAACGCAAGCAGCTCACCTCAGGCACGACATGGCATGCGGCCGGCCTCATCGGCCAGCTGCGCGCCTCGCAGAACATGACGCGGCTCGCCAAATATTCCGCCGACCTCTATGTCAAGCTGGAAGCCGAAACCGGCATCGGCACCGGCATGCGGCAGAACGGCTCGATGACTGTGGCGCTGACCGACGAGCGCAAGGAAGAGATCTATCGTCAGGCCTCGCTCGCCCGCGCCTTCGATGTCGATGTGCGCGAGATCTCGGTCGAAGAGGTCAAGGCCATGTATCCGCATCTCAACACGGCGGATGTGAAGGCGGCGGTGCATCTACCGCTCGACGGCCAATGCGATCCGGCCAATATCGCCATGGCGCTGGCCAAGGGCGCGCGCCAGAACGGCGCGACGGTGATCGAGGGCGTCACCGTGCTCTCGGTGCAGCAGAAGGACGGCCGCGTCACCGGCGTCACCTGCGAGCAAGCAGGCGAAATCTACACCATCGAAACCGAAAACGTCGTCAATGCCGGCGGCATGTGGGGCCGCGATCTCGCCGCGCAATCCGGCGTCACCGTGCCCTTGCATGCCTGCGAGCATTTCTACATCGTCACCGAGCCGATCCCCAATCTCAAGCAACTCCCCGTGCTGCGCGTGCCGGATGAATGCACCTATTACAAGGAGGATGCCGGCAAGATGCTGATCGGCGCCTTCGAGCTGAAGGCCAAGCCCTGGCCGGCCAAGGGCGAAAAGATCCGCGCCGATTTCTGCTTCGACCAGCTGCCGGAGGATTTCGACCACTTCCAGCCGATCCTCGAAAACGCCATCAATCGCATGCCGATGCTGGAGACCGCCGGCATCCATACCTTCTTCAACGGCCCGGAAAGCTTTACCCCCGACGACCGCTATTATCTCGGCGAGGCGCCGGAGCTGAAAGGGTACTGGGTCGCGGCCGGCTATAATTCCATCGGCATCGTCTCCTCCGGCGGCGCCGGTATGGCGCTGGCGCAATGGATGAACGACGGCGAAGCCCCCTTCGACCTCTGGGAAGTCGATATCCGCCGCGCCCAGCCCTTCCAGAAGAACCGCACCTATCTGCGCGAACGCGTCTCGGAAACGCTAGGGCTGCTCTATGCCGACCATTTCCCCTATCGCCAGATGGCGACCGCCCGCGGCGTGCGCCGCACGCCGCTGCATGAACACCTGAAGGCGCGCGGCGCCGTCTTCGGCGAAGTGGCCGGCTGGGAGCGCGCCAACTGGTTCGCCAAACCCGGTCAGGAACGCGAATACCGCTATAGCTGGCAGCGGCAGAACTGGTTCGAGAACCAGCGCGAGGAGCATCTGGCCGTGCGCAACGGCGTCGGGTTCTTCGACATGACCTCCTTCGGCAAGATCCGCGTCGAGGGCCGCGATGCCGTGGCTTTTCTCAACCGCATCTGCGCCAACCAGATCGATGTCGAGCCCGGCCGCATCGTCTATACGCCGCTGTTGAACCAACGGGGCGGCATCGAAAGCGACCTGACGGTCACAAGGCTTTCGGAAACGGCCTTCCTGTTGGCCGTGCCCGGCGCGACGCTGCAGCGCGATCTTTCCTGGCTGCGCAGGCATCTCAGCGACGAATTCGTTGTTATCACCGATGTCACATCAGCCGAATCTGTGCTTTGCGTCATGGGACCGAAGGCGCGCGAGCTGATGAACCGCGTTAGCCCCGATGATTTCTCCAACGAAGCGCATCCCTTCGGCACGGCGCGCGAGATCGAGATCGGCATGGGCCTCGCCCGCGCCCATCGCGTCACCTATGTCGGCGAGCTCGGCTGGGAACTTTACGTTTCCTCCGACCAGACCGCCCATGTCTTCGAGACGCTGGAAGAGGCCGGAAGCGATCTGGGCTTAAAACTCTGCGGCATCCATACGCTGGATAGCTGCCGCATCGAAAAGGCCTTCCGCCATTTCGGCCATGACATTACCGACGAGGACCATGTGCTGGAAGCAGGCCTCGGCTTCGCTGTGAAAGCCGCCAAGGGCGATTTCATCGGTCGCGATGCCGTGCTGCGCAAGAAGGAGACGGGGCTGAAGCGCCGGCTGGTGCAGTTCAGGCTGACCGACCCGCAGCCGCTGCTGTTCCACAACGAGGCACTGGTGCGCGACGGAAAAATCGTCTCGACCATCACCTCTGGCAATTACGGTCATTATCTCGGCGGCGCCATCGGCCTCGGCTACGTGCCCTGCGAAGGCGAAAGCGCCGAACAGGTGCTCGCCTCGTCCTACGAGATCGAAATCGCCGGCACGCGCGTCAAGGCCGAGGCCTCGCTGGCGCCGATGTACGATCCGAAGTCGGAGCGAGTCAGGATGTAG
PROTEIN sequence
Length: 817
MKAIPNKARAVIIGGGVSGCSVVYHLAKLGWTDVVLLERKQLTSGTTWHAAGLIGQLRASQNMTRLAKYSADLYVKLEAETGIGTGMRQNGSMTVALTDERKEEIYRQASLARAFDVDVREISVEEVKAMYPHLNTADVKAAVHLPLDGQCDPANIAMALAKGARQNGATVIEGVTVLSVQQKDGRVTGVTCEQAGEIYTIETENVVNAGGMWGRDLAAQSGVTVPLHACEHFYIVTEPIPNLKQLPVLRVPDECTYYKEDAGKMLIGAFELKAKPWPAKGEKIRADFCFDQLPEDFDHFQPILENAINRMPMLETAGIHTFFNGPESFTPDDRYYLGEAPELKGYWVAAGYNSIGIVSSGGAGMALAQWMNDGEAPFDLWEVDIRRAQPFQKNRTYLRERVSETLGLLYADHFPYRQMATARGVRRTPLHEHLKARGAVFGEVAGWERANWFAKPGQEREYRYSWQRQNWFENQREEHLAVRNGVGFFDMTSFGKIRVEGRDAVAFLNRICANQIDVEPGRIVYTPLLNQRGGIESDLTVTRLSETAFLLAVPGATLQRDLSWLRRHLSDEFVVITDVTSAESVLCVMGPKARELMNRVSPDDFSNEAHPFGTAREIEIGMGLARAHRVTYVGELGWELYVSSDQTAHVFETLEEAGSDLGLKLCGIHTLDSCRIEKAFRHFGHDITDEDHVLEAGLGFAVKAAKGDFIGRDAVLRKKETGLKRRLVQFRLTDPQPLLFHNEALVRDGKIVSTITSGNYGHYLGGAIGLGYVPCEGESAEQVLASSYEIEIAGTRVKAEASLAPMYDPKSERVRM*