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SCNpilot_expt_1000_bf_scaffold_2828_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2828_curated_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..946)
DNA (945bp) protein (315aa)
Transcriptional regulator, DeoR family n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZQY3_RHILW
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACI56705.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_2828_curated_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1138..2097
DNA (960bp) protein (320aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
tal; transaldolase B (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Transaldolase n=1 Tax=Rhizobium sp. RepID=L0NIC1_RHISP
SCNpilot_expt_1000_bf_scaffold_2828_curated_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2214..2891
DNA (678bp) protein (226aa)
membrane protein n=1 Tax=Rhizobium phaseoli RepID=UPI0002DE9AD6
Uncharacterized protein {ECO:0000313|EMBL:AJC81202.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2828_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2940..3254)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00169483};; Rhamnose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01663}; Type-3 mutarotase {ECO:0000256|HAMAP-Rule:MF_01663}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
L-rhamnose 1-epimerase; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
L-rhamnose mutarotase n=1 Tax=Rhizobium meliloti RepID=UPI0003661C60
SCNpilot_expt_1000_bf_scaffold_2828_curated_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3278..4507)
DNA (1230bp) protein (410aa)
(2Fe-2S)-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00037AD59D
Putative dioxygenase, alpha-subunit {ECO:0000313|EMBL:AHK44977.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2828_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4785..7235)
DNA (2451bp) protein (817aa)
Aminomethyltransferase GcvT {ECO:0000313|EMBL:EYR82120.1}; EC=2.1.2.10 {ECO:0000313|EMBL:EYR82120.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Aminomethyltransferase GcvT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D397_9RHIZ
FAD dependent oxidoreductase/aminomethyl transferase
SCNpilot_expt_1000_bf_scaffold_2828_curated_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7240..9684)
DNA (2445bp) protein (815aa)
dimethylglycine dehydrogenase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4]
dimethylglycine dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI00031F50CF
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:KDP74925.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_2828_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9826..10545
DNA (720bp) protein (240aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00035CA107
Transcriptional regulator {ECO:0000313|EMBL:EJB02212.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
LysR family transcriptional regulator
Displaying 8 items

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