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SCNpilot_expt_1000_bf_scaffold_2828_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 9826..10545

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00035CA107 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 240.0
  • Bit_score: 396
  • Evalue 1.90e-107
Transcriptional regulator {ECO:0000313|EMBL:EJB02212.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 240.0
  • Bit_score: 386
  • Evalue 3.60e-104
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 240.0
  • Bit_score: 385
  • Evalue 1.40e-104

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCAGATCGAACTCATCGAAACCTTCCTCGACCTGATGGAGACGCGCAGTTTCAACCGCACCGCCGAGCGCCTGAATCTGACGCAATCCACCGTCTCGCATCGCATCAAGGCGCTGGAGGCGGCGTTCAACCGCAAGCTTTTCACCCGCAACAAGGGCGGCACGGCGCCCACCGCCTCGGGCCTGCGCTTCCTCGACCATGCTCGCGCCCTGCAACACCAGTGGCACGAGGCGGCGCGGGCGGTGGAAAGTGCGGGCGCCTATGAGCGCTCGATGCGCATCGGCGTGCAGCATGACGTCGCCGAGCGGCTGGCCGGCCGCTGGCTCGCCGCCATCCGCGCCGACCTGCCGGAAATCTCCCTTTACGTGGAGGTGGATTATTCCGGCCAGATGAACCGCGATCTCGGGGCCGGCGATCTCGATCTCGCCATCCTCTACACGCCGCATTACCTGCCGGACCTGCATTACGAGCGCATTGGCGAAATGCCGTATCTGCTGGTTTCAACTGCCGAAACCACAATTGCCGATATCCGCCCGGAACAGTATATTCAAGCAGTCTATTCGCCGGCCTTCGACCGCGCCCACCGCCTCGCGCTGCCGCATCTGTCGGCGGCGCCCCTGGCGCTCGGCCAGAACATGGCGATCGCCGGCCTGCTGCGCAGCCTCGGCGGAGCCGCTTATGTCACGGCGGCGACCGCCGCCGAATTGCAGGCCGAAGGC
PROTEIN sequence
Length: 240
MQIELIETFLDLMETRSFNRTAERLNLTQSTVSHRIKALEAAFNRKLFTRNKGGTAPTASGLRFLDHARALQHQWHEAARAVESAGAYERSMRIGVQHDVAERLAGRWLAAIRADLPEISLYVEVDYSGQMNRDLGAGDLDLAILYTPHYLPDLHYERIGEMPYLLVSTAETTIADIRPEQYIQAVYSPAFDRAHRLALPHLSAAPLALGQNMAIAGLLRSLGGAAYVTAATAAELQAEG