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SCNpilot_expt_1000_bf_scaffold_1389_curated_29

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 26934..27674

Top 3 Functional Annotations

Value Algorithm Source
Protein FixR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D225_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 246.0
  • Bit_score: 441
  • Evalue 4.10e-121
Dehydrogenase {ECO:0000313|EMBL:EYR78092.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 246.0
  • Bit_score: 441
  • Evalue 5.70e-121
fixR; Protein fixR similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 246.0
  • Bit_score: 427
  • Evalue 3.30e-117

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGACCGCTGAACGCCCCACCATGCTGCTGACGGGCGCGAGCCGAGGCATCGGACACGCAACGGTGAAACTGTTCCAGTCGAAGGGCTGGCGCATCCTCACGGTGTCCCGCCAGCCCTTTTCGGAGGAATGCGCCTGGCCCGAGGCGCGCGAGAGCCATATCCAGGCCGACCTCGCCGATCTCTCCCAGATCGACCGGCTTGCGGACGTGGTGCGCGAGCGCCTGCCGAGCGGCAGGCTGCAGGCGTTGGTCAACAATGCCGGCATATCCCCGAAGGGGCCGAACCGCAGCCGCCTCGGCGTCGCCGACAGCACCGCCGACGTCTGGACGCAGGTGCTGAACGTCAATCTGGTGTCCACGGCATTGCTGGCCCGCGCGCTGCTGCCGCAACTGGAAGCCGCCCGCGGTTCCATCGTCAACGTCACCTCGATCGCCGGCTCGCGCGTCCATCCTTTCGCGGGCGTCGCCTATGCCGCATCCAAGGCGGGGCTTGCGGCGCTGACGCGGGAAATGGCGCATGAATTCGGCAAGCGCGGCGTGCGCGCCAATGCGATCGCGCCCGGCGAGATCGAAACCTCGATTCTGTCGCCCGGCACGGAGGCGCTGGTGGCGGCGGAAGTGCCGATGGGCCGCCTGGGCGAGCCCCGTGAAGTTGCCGAAACCATCTATTTCCTGTGCACCGAGCAGTCGTCCTACATCAACGGCGCCGAAATCCACATCAATGGCGGCCAACACGTCTGA
PROTEIN sequence
Length: 247
MTAERPTMLLTGASRGIGHATVKLFQSKGWRILTVSRQPFSEECAWPEARESHIQADLADLSQIDRLADVVRERLPSGRLQALVNNAGISPKGPNRSRLGVADSTADVWTQVLNVNLVSTALLARALLPQLEAARGSIVNVTSIAGSRVHPFAGVAYAASKAGLAALTREMAHEFGKRGVRANAIAPGEIETSILSPGTEALVAAEVPMGRLGEPREVAETIYFLCTEQSSYINGAEIHINGGQHV*