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SCNpilot_expt_1000_bf_scaffold_1068_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3601..5253)

Top 3 Functional Annotations

Value Algorithm Source
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 550.0
  • Bit_score: 1042
  • Evalue 0.0
betA; choline dehydrogenase; K00108 choline dehydrogenase [EC:1.1.99.1] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 550.0
  • Bit_score: 1034
  • Evalue 0.0
  • rbh
choline dehydrogenase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000361FA07 similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 550.0
  • Bit_score: 1038
  • Evalue 0.0

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGCAGAACGCAGATTTCGTCATCATCGGCTCCGGCTCGGCGGGTTCGGCCATGGCTTACCGGCTGTCGGAGGACGGCAAGCACAAGGTGGCCGTGCTGGAATTCGGCGGCAGCGATTTCGGGCCGTTCATCCAGATGCCGGCGGCCCTTGCCTGGCCGATGAGCATGAAGCGCTACAACTGGGGCTACCTTTCCGAGCCCGAGCCGAACCTCAACAACCGTCGCATCACCGCCCCGCGTGGAAAAGTGATCGGCGGCTCCTCCTCGATCAATGGCCTCGTCTATGTGCGCGGCCATGCCGGGGACTTCAACCGCTGGGAGGAACTGGGCGCGCAAGGCTGGGCCTATGCCGACGTGCTGCCCTACTTCAAGCGCATGGAGCACAGCCATGGCGGCGAGGAAGGCTGGCGCGGCACGGACGGGCCGCTGCATGTGCAGCGCGGGCCGATGACCAATCCGCTGTTCCACGCCTTCATCCAGGCCGGCCAGCAGGCCGGTTTCGAGACGACGCAGGATTATAACGGCTCGAAGCAGGAAGGCTTCGGGCTGATGGAGCAGACCATCTACCAGGGCCGGCGCTGGTCGGCCGCGAACGCCTATCTGAAGCCGGCGCTGAAGCGGCCGAATGTCGAACTCATCCACTGCTTCGCGCGAAAGATCGTCATCGAGAACGGCCGGGCGGTCGGCGTCGAAATCGAGCGGGGCGGCAAGGTCGAGGTCGTCAGGGCGAAGCGCGAGGTGATCGTCGCCGCCTCCTCCTTCAACTCGCCGAAACTCTTGATGCTCTCCGGCATCGGCCCGGCGCAGCACCTGAAGGACATGGGCATCGAGGTGAAGGTCGACCGTCCCGGCGTCGGCGCCAATCTTCAGGACCATATGGAATTCTATTTCCAGCAGGTCTCGACCAAGCCGGTGTCGCTGTATTCCTGGCTGCCCTGGTTCTGGCAGGGGGTCGCCGGCGCGCAATGGCTGCTTTCCAAGGGCGGGCTCGGCGCCTCGAACCAGTTCGAGGCCTGCGCCTTCCTGCGCTCCGCGCCGGGCGTCCGGCAACCGGATATCCAGTATCACTTCCTGCCGGTCGCCATCAGCTATGACGGCAAGGCCGCCGCCAAGAGCCACGGTTTCCAGGTGCATGTCGGCTATAACCTGTCGAAATCGCGCGGCAATGTCACCTTGCGTTCTTCGGATCCGAATGCCGAGCCGGTGATCCGCTTCAATTATATGAGCCACCCGGAAGACTGGGAAAAATTCCGCCACTGCGTGCGCCTCACCCGCGAGATCTTCGGCCAGAAGGCTTTCGACGCGTTTCGCGGGCCGGAAATCCAGCCGGGCGAATCCGTCCAGAGTGACGAGCAGATCGACGCCTTCCTGCGCGAGCATCTGGAAAGCGCCTATCACCCCTGCGGTACCTGCAAGATGGGCGCGGCGACGGACCCGACGGCGGTCGTCGATCCCGAATGCCGGGTCATCGGCGTCGAAGCCTTGCGTGTCGCCGACAGCTCGATCTTCCCGCATGTGACCTATGGCAACCTCAACGGCCCGTCGATCATGACCGGCGAAAAGGCCGCCGACCACATTCTCGGCAAGCAGCCCCTGCCCCGCTCCAACCAGGAACCGTGGATCAATCCGCGCTGGCAGGAAAGCGACCGGTGA
PROTEIN sequence
Length: 551
MQNADFVIIGSGSAGSAMAYRLSEDGKHKVAVLEFGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGLVYVRGHAGDFNRWEELGAQGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGPMTNPLFHAFIQAGQQAGFETTQDYNGSKQEGFGLMEQTIYQGRRWSAANAYLKPALKRPNVELIHCFARKIVIENGRAVGVEIERGGKVEVVRAKREVIVAASSFNSPKLLMLSGIGPAQHLKDMGIEVKVDRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGVRQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGNVTLRSSDPNAEPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAFRGPEIQPGESVQSDEQIDAFLREHLESAYHPCGTCKMGAATDPTAVVDPECRVIGVEALRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKQPLPRSNQEPWINPRWQESDR*