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SCNpilot_expt_1000_bf_scaffold_1068_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 18690..20300

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035FC57F similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 538.0
  • Bit_score: 898
  • Evalue 2.60e-258
ATP-dependent DNA ligase {ECO:0000313|EMBL:KJF65805.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 538.0
  • Bit_score: 899
  • Evalue 2.20e-258
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 538.0
  • Bit_score: 896
  • Evalue 5.40e-258

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGAAAGCCTTCGCCGCCCTTCTCGACCGCCTTGTGCTGACGCCCGCGCGCAACGGCAAGCTGAAGCTGCTCTCCGATTATTTCCGCGATACGCCCGATCCCGACCGCGGCTACGGACTTGCCGCCATTGCCGGCACGCTGGATATACGCTCGGTCAAGCCGGCCATGCTGCGCGAACTCGTGCTCGAGCGCATGGACGAGGCGCTGTTCCGTTATTCCTACGATTATGTCGGCGATCTCGCCGAGACGATCTCGCTGGTCTGGGACCAGGAGCGCGAGGACAGGACCGCCGACGATCCCGGCCTTGGCGCCGTCATCGCCGAGATGAACCGGCTGGGGCGCACGGAGGTGCGCAGCCATGTGCGAACGCTGCTCGACCGGCTGGACACGTCGAGCCGTTTCGCCTTCCTGAAACTCGTCACCGGCGGCCTGCGCATCGGCGTCTCGGCCCGGCTTGCCAAGCAGGCGCTGGCCGATTTCGCCGGCAAGGATGTCGGCGAAATCGAGACGCTGTGGCACGGGCTGGAACCGCCCTACCTGCCGCTCTTCGCCTGGCTGGAAGGCAAAAGCGACCGGCCGGTGCTGGCGACGCCCGCCATCTTTCATTCGGTGATGCTGTCGACGCCGGTGCAGGAGGGCGATCTCGACGGGCTCGACCCGAAGGATTTCGCCGCCGAATGGAAATGGGACGGAATTCGCGTGCAATTGTCGGGGTTCGGTTCGACCCGGCGGCTCTATTCGCGCAGCGGCGACGATATTTCAGGCGCATTCCCCGATATCGTCGCGGCGATGAATTTCGAGGGCGTGATGGATGGCGAGCTGCTGGTCGGTGGCACCGCCCGTTCCAACAGCCCGACCCGCACCTTTGGCGACCTGCAGCAACGCCTGAACCGCAAGACGGTCAGCGGCAGGATGCTGGAGGAATTCCCGGCCTTCATCCGCGCCTATGACCTGCTGTTCGACGGCGATGCGGATATCCGCCCGCAAACCTATCTCGAACGCCGCACCCGCCTGACCGGGCTGATCGAGCGCGCGCCACACGACCGCTTCGACCTCTCGCCGCTGGTGCCGTTTTCAAGCTGGGAGGAACTGGACCGGCTGCGCATGGAGCCGCCCGATCCGGTCATCGAGGGCGTGATGATCAAGCGGCTCGACAGTTCCTATCAGGCCGGCCGCGCCAAGGGGCCATGGTTCAAGTGGAAACGCAACCCCTATAATATCGACGCCGTGCTGATGTATGCCCAGCGCGGCCATGGCAAGCGCTCCAGCTATTATTCCGATTTCACCTTCGGCGTCTGGACCGAGCTGGATGGCAAGGAACAACTCGTGCCGGTGGGAAAAGCCTATTTCGGCTTCACCGATGCCGAGCTGGAGGAACTCGACCGCTTCGTGCGCAACAACACCACCGACCGTTTCGGCCCGGTAAGGGCGATCCGCGCCGAGCGCGATTTCGGCTATGTGGTCGAGGTCGCCTTCGAAGGCATCAACCGCTCCAGCCGCCACAAGTCCGGCGTCGCCATGCGTTTTCCCCGCATCGCGCGGCTGCGCGCCGACAAGCCGCCGATCGAGGCAGACCGGCTCGACACGCTGCTGGCGATGATCGAGGGCTGA
PROTEIN sequence
Length: 537
MKAFAALLDRLVLTPARNGKLKLLSDYFRDTPDPDRGYGLAAIAGTLDIRSVKPAMLRELVLERMDEALFRYSYDYVGDLAETISLVWDQEREDRTADDPGLGAVIAEMNRLGRTEVRSHVRTLLDRLDTSSRFAFLKLVTGGLRIGVSARLAKQALADFAGKDVGEIETLWHGLEPPYLPLFAWLEGKSDRPVLATPAIFHSVMLSTPVQEGDLDGLDPKDFAAEWKWDGIRVQLSGFGSTRRLYSRSGDDISGAFPDIVAAMNFEGVMDGELLVGGTARSNSPTRTFGDLQQRLNRKTVSGRMLEEFPAFIRAYDLLFDGDADIRPQTYLERRTRLTGLIERAPHDRFDLSPLVPFSSWEELDRLRMEPPDPVIEGVMIKRLDSSYQAGRAKGPWFKWKRNPYNIDAVLMYAQRGHGKRSSYYSDFTFGVWTELDGKEQLVPVGKAYFGFTDAELEELDRFVRNNTTDRFGPVRAIRAERDFGYVVEVAFEGINRSSRHKSGVAMRFPRIARLRADKPPIEADRLDTLLAMIEG*