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SCNpilot_expt_1000_bf_scaffold_1068_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 24544..25842

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036EC2D8 similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 423.0
  • Bit_score: 514
  • Evalue 1.50e-142
Multidrug efflux transporter {ECO:0000313|EMBL:EYR79176.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 426.0
  • Bit_score: 505
  • Evalue 9.60e-140
transmembrane transporter protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 422.0
  • Bit_score: 501
  • Evalue 3.10e-139

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGCCCTCGGTGGTGCGCGATATCGGCGGCCTGCCGCTGTTCGCCTGGGTGACGACGCTCTATGTCACGGCCTCGGTGCTGGGTTCGGTGTTCATCGCCATCCGCCCGCGGGGCATGAGCCTCAACCGCACCTATTCGATCGGAGCGGCGCTGTTCCTGCTGGGAAGCCTGATCTGCGCCATCGCGCCGAGCATGGAGACCGTGCTCATCGGGCGCGCCGTGCAGGGGTTCGGGGCTGGCACGCTGGCGACGCTGGGCTATGCCTTCATCCGCTACGCCTATCCCGAAAGCCTGTGGAACAAAGCCTCGACGCTCTATGCGGCGATCTGGGGCATTTCCACCTTCGTCGGCCCGACGCTCGGCGGTTTCTTCGCCGAAGGCAGCGCCTGGCGCCATGCCTTCGCGCTGATCGTGCCCTTTGCGCTGGCCATGGGCCTGCTGGCCCCCTGGTTGCTGCCGAGAGGCGAGGACGACCGGCAGGAAACCAAGGCGCCCGTCGGGCAGATGGTGCTGCTGACGGTGTCGCTGCTGCTGGTCAGCTTTGCAGGCACCACGGAAAATGTCGGCCTGCGGCTGTGGCTGGTGGTCGGCGCGGCCATCGCCATCGGCGGCATGGTCGTGGTCGAGCGGCGGGCGTCGCTGCGCCTGCTGCCGCGCGGCGGCATCGCGCTGTCCATGCCGATCTCGCGGGTGTATCTGGCGATGTTCATGCTGCTGGGCGCGCTGACATGCGACATCTACATTCCCTACTTCCTGCAGACCCTGCATCGCGTCACGCCGCTGGTCTCGGGTTACATCGTCGCGCTGGTGGCGCTCGGCTGGACGGCGGCGGCCTTTCTCAGCAGCAATTTCAAGGGCGAGACGATGCGCCGGTCGATCATCTGGGGTGGCCTGATGGAGGCGGCCTGCATCGGGCTCCTGGCTTTCAGCCTGGCGCGGCCAAATCCCGAGGGTGACCTTATGCTGCTCTCGGCGGCGACTGTGCTGATCTTCGGCATGGGGTTCGGCGTCGGCCTCGGCTGGGCGCATCTGGTTACCCATATCCTGCATCTCGCCGCCGATGACGAGAAGGACAAGGCGTCCGCCGGCATCACCACCATGCAATCGCTCGGCAGCGCCTTTGGCGCGGCTCTGGCTGGCGTGACGGTCAACAGCACCGGCCTGCTGCATCCGGGCGGCCTCGAAGGCAATGCATCGGCTGCCGCCTGGCTCTTCGCGCTCTTTGCCCTGCCGGCGCTGGCGGCGGCGCTTGCCGCGCTGTCGCTGCCGCGTCCGCGCTTCGGGGAGATGACCGCGTGA
PROTEIN sequence
Length: 433
MPSVVRDIGGLPLFAWVTTLYVTASVLGSVFIAIRPRGMSLNRTYSIGAALFLLGSLICAIAPSMETVLIGRAVQGFGAGTLATLGYAFIRYAYPESLWNKASTLYAAIWGISTFVGPTLGGFFAEGSAWRHAFALIVPFALAMGLLAPWLLPRGEDDRQETKAPVGQMVLLTVSLLLVSFAGTTENVGLRLWLVVGAAIAIGGMVVVERRASLRLLPRGGIALSMPISRVYLAMFMLLGALTCDIYIPYFLQTLHRVTPLVSGYIVALVALGWTAAAFLSSNFKGETMRRSIIWGGLMEAACIGLLAFSLARPNPEGDLMLLSAATVLIFGMGFGVGLGWAHLVTHILHLAADDEKDKASAGITTMQSLGSAFGAALAGVTVNSTGLLHPGGLEGNASAAAWLFALFALPALAAALAALSLPRPRFGEMTA*