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SCNpilot_expt_1000_bf_scaffold_2486_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 5626..6435

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium gallicum RepID=UPI0003789D0B similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 270.0
  • Bit_score: 493
  • Evalue 1.70e-136
Spermidine/putrescine ABC transporter permease protein {ECO:0000313|EMBL:AJC81198.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 270.0
  • Bit_score: 494
  • Evalue 1.10e-136
spermidine/putrescine ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 270.0
  • Bit_score: 491
  • Evalue 1.50e-136

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGCGCTCTGATCGCTCCGCATCCTTTTCGCTGAAACTCGCCGCTGGGCTGGGGCTGCTGTTCCTGCACCTGCCGATCCTGCTGATCTTTGTCTACGCCTTCACGACGGAAGAGAAGAGCTATCAATGGCCGCCGCCCGGCCTGACCACGCAATGGTTCGCCATTGCCTGGAACCGGCCGGATGTGTGGGCTGCGCTGGGCCTGTCGGTGAAGGTGGCGAGCATCGCGACGCTGATCGCGCTGGCGCTCGGCACGCTCTGCGCCGCTGCCGTTTCCCAGACGCGGTTCTTCGGCCGCGAGGCGATCTCGCTTTTGGTCGTGCTGCCGATCGCGCTGCCCGGCATCATCACCGGCATTGCGTTGCGCTCGGCCTTCAGTCTGCTCGACATTCCCTTCTCGGTCTGGACCATCGTGCTCGGCCACGCCACCTTCTGCGTCGTCGTGGTCTACAACAATGCGGTGGCGCGCTTCCGGCGCACCTCCGGCTCGCTGATCGAGGCCTCGATGGATCTCGGCGCAGACGGGTTCCAGACCTTCCGGCATGTGGTGCTGCCAAATATCGGCACGGCGCTGCTCGCCGGCGGCATGCTCGCCTTCGCTTTGTCCTTCGACGAGGTCATCGTCACCACCTTCACCGGCGGCCAGCAATCGACGCTGCCGATCTGGATGCTGGAGGAACTGATCCGCCCGCGCCAGCGGCCGGTCACCAATGTCGTCGCCATGGTCGTGGTGCTGGTCACCTTCCTGCCGATCCTGGCCGCCTATTACCTCACCCGCGACGGCGACCAGATCGCCGGCGGCGGAAAATAA
PROTEIN sequence
Length: 270
MRSDRSASFSLKLAAGLGLLFLHLPILLIFVYAFTTEEKSYQWPPPGLTTQWFAIAWNRPDVWAALGLSVKVASIATLIALALGTLCAAAVSQTRFFGREAISLLVVLPIALPGIITGIALRSAFSLLDIPFSVWTIVLGHATFCVVVVYNNAVARFRRTSGSLIEASMDLGADGFQTFRHVVLPNIGTALLAGGMLAFALSFDEVIVTTFTGGQQSTLPIWMLEELIRPRQRPVTNVVAMVVVLVTFLPILAAYYLTRDGDQIAGGGK*