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SCNpilot_expt_1000_bf_scaffold_2486_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7888..8733)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: uncharacterized membrane protein in ycf23-apcF intergenic region-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1AE5B similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 280.0
  • Bit_score: 446
  • Evalue 1.90e-122
Manganese ABC transporter permease protein {ECO:0000313|EMBL:GAK68696.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 279.0
  • Bit_score: 451
  • Evalue 8.20e-124
yfeD; Chelated iron transport system membrane protein YfeD similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 279.0
  • Bit_score: 443
  • Evalue 6.60e-122

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAGCGAGTATCTCGAACTGGCGATCCTGCCTTTCCAGCTTCCCTTCATGCAATATGCCTTCGTCATCTCGGTGATGGTCGCCATTCCCATGGCGCTGCTCTCCTGCCTGCTGGTGCTGAAAGGCTGGTCGCTGATGGGCGATGCGGTCTCCCATGCCGTACTGCCCGGCATCGTCATCGCCTATATCGCCGGCCTGCCGCTGGCGGTCGGGGCGTTCACCGCCGGCATGATCTGCGCGCTGGCGACCGGTTACCTCAAGGAAAACAGCCGCATCAAGGAAGATACGGTGCTCGGAATCGTCTTTTCCGGCATGTTCGGCCTCGGGCTGGTGCTCTATGTAAAGGTGCAGGCCGATGTGCATCTCGACCATATCCTGTTCGGCGACGTGCTCGGCATCGCGCCCTCCGACCTGATCGAGACCGGCATCATCGCCCTCATCGCCACCGCCTTCCTGGTGCTGCTGCGCAAGGACCTGCTGTTGCATGCCTTCGATGCCCAGCATGCCCGCGCCATCGGCCTGCCGGTGCGGCTTTTGCATTACGGCTTGCTGACGGTGCTGTCTCTGACGGTGGTCGGCGCGCTGAAGGCGGTCGGCATCATCCTGTCGGTGTCACTGCTGGTCGCCCCCGGCGCCATCGCCTTCCTGCTGACCCGCACCTTTCGCGCCATGGCGATCACGGCAGTGGCGATTGCGGTCGGGTCTTCGCTGGCCGGCATCTATGTCAGCTTCTTTCTCGACAGTGCACCTGCGCCCACCATCGTGCTGATGATGAGCGCCCTCTTCATTCTCGCCTTCATCCGCGTGACGCTCGCCGCCCGGCGAACGGACCGGGCAGCGGGATAA
PROTEIN sequence
Length: 282
MSEYLELAILPFQLPFMQYAFVISVMVAIPMALLSCLLVLKGWSLMGDAVSHAVLPGIVIAYIAGLPLAVGAFTAGMICALATGYLKENSRIKEDTVLGIVFSGMFGLGLVLYVKVQADVHLDHILFGDVLGIAPSDLIETGIIALIATAFLVLLRKDLLLHAFDAQHARAIGLPVRLLHYGLLTVLSLTVVGALKAVGIILSVSLLVAPGAIAFLLTRTFRAMAITAVAIAVGSSLAGIYVSFFLDSAPAPTIVLMMSALFILAFIRVTLAARRTDRAAG*