ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2486_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(13010..14506)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 498.0
  • Bit_score: 933
  • Evalue 1.70e-268
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 498.0
  • Bit_score: 923
  • Evalue 2.20e-266
Lysine--tRNA ligase n=1 Tax=Rhizobium sp. CF142 RepID=J2B003_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 498.0
  • Bit_score: 933
  • Evalue 1.20e-268

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
ATGACCGACATCAAGCCAGATACCGCCCTCTCCTCCGACGCCACCGAAGTGCGCGCGCAAAAACTCAAGCTGCTGCGCGAAAAGATCGGCGACGTCTATCCGGCCCATTTCCATCGCACGCTGACCAATGGCGAACTGGCGCAGAAATACGAAGGCCTGGAAGCCGACGTCGAAACGGGCGACGTGGTGACCGTCGCCGGCCGCGTCTATTCCTCGCGCAATTCCGGCATGTTCATGGATATCCATGACGCCGCCGGCAAGATTCAGATCTTTTCGCACAAGGATACGACGCCGGAAGAGGCGCGCGCGCTGCTGCCGATGATCGACATCGGCGACATCATCGGCGTCACCGGCGTCGTGCGCCGCACCAAGCGCGGCGAACTGACGATCAACGCCCAGAAGATCGAGATGCTGACCAAGTCGCTGCTGCCGATGCCGGAAAAATGGCACGGCGTCTCCGACATCGAGATCCGCTATCGCAAGCGCCATCTCGACATCATGACCAACGAGGAATCGAAGCTGCGCTTCCAGCAGCGGTCGAAGATCGTCTCCGGCATCCGCCGCTTCATGGAAGACGACGGCTTCATGGAAGTCGAGACCCCCATGCTGCATTCCGTCTATGGCGGCGCCACCGCCGAGCCCTTCAAGACGCATCACAATACGCTCAAGCAGGACATGTACCTGCGCATCGCGCCGGAGCTTTTCCTGAAGCGCACGCTGGTCTCCGGCCTCACCGACAAGGTGTTCGAGATCAACCGGAACTTCCGCAACGAGGGTGTGTCGACACGGCACAATCCCGAATTCACCATGATGGAATGCTACTGGGCCTATGCCGATTACGAGGACATCATGGACCTCGTCGAGCGGCTGTTCGCCGAGCTGGCGATGAAGATCCACGGCTCGACCGAATTCGCCTATGGCGACAAGCAACTCTCCTTCAAGGGCCCGTTCAAGCGCGTGCCGATGCCTGACGCCGTCAGGCAAGTGACCGGCATCGATTTCCTCGCCATCAAGACCGACGAGGACGCCCGCGCCGCTGCCAAGGCTGCCGGCTTCGAGGTCGAGAAGGACTGGACCTGGGGTGAATGCCTCGCCTTCATCTTCGAGGAGAAGGTCGAGGGCACGCTGATCCAGCCGAGCCATGTCACGCATTTTCCGAAGGACATCTCGCCCTTCGCCAAGGAAGTGCCGGGGGAACGGCGCCTCGTCGAGCGTTTCGAGACCTATTGCAACGCCTGGGAACTGGGCAACGCCTTCTCCGAGCTCAACGACCCCGAAGAGCAGCGCGCCCGCATGGTCGAGCAACTCCAGCAGGCTCACGCCCGCGGCGAGAAGGACAAGGAACTGGACGACGAATTCCTCGACGCCATCGACCAGGGCATGCCGCCGGCCGGCGGCCTCGGTATCGGCGTCGACCGCCTGATCATGCTGCTCACCAACGCCCCGTCGATCCGCGACGTCATCCTCTTCCCCGCCCGTCGTGGCAAGGCGGATTGA
PROTEIN sequence
Length: 499
MTDIKPDTALSSDATEVRAQKLKLLREKIGDVYPAHFHRTLTNGELAQKYEGLEADVETGDVVTVAGRVYSSRNSGMFMDIHDAAGKIQIFSHKDTTPEEARALLPMIDIGDIIGVTGVVRRTKRGELTINAQKIEMLTKSLLPMPEKWHGVSDIEIRYRKRHLDIMTNEESKLRFQQRSKIVSGIRRFMEDDGFMEVETPMLHSVYGGATAEPFKTHHNTLKQDMYLRIAPELFLKRTLVSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMDLVERLFAELAMKIHGSTEFAYGDKQLSFKGPFKRVPMPDAVRQVTGIDFLAIKTDEDARAAAKAAGFEVEKDWTWGECLAFIFEEKVEGTLIQPSHVTHFPKDISPFAKEVPGERRLVERFETYCNAWELGNAFSELNDPEEQRARMVEQLQQAHARGEKDKELDDEFLDAIDQGMPPAGGLGIGVDRLIMLLTNAPSIRDVILFPARRGKAD*