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SCNpilot_expt_1000_bf_scaffold_2486_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19279..19956)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2H769_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 219.0
  • Bit_score: 257
  • Evalue 1.70e-65
TetR family transcriptional regulator {ECO:0000313|EMBL:KGD91960.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 216.0
  • Bit_score: 260
  • Evalue 1.70e-66
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 213.0
  • Bit_score: 253
  • Evalue 5.90e-65

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGACCGACACCCGAAAGCAGGCGACCGAGGCGGCCGCACCGACGCCACCGATCACCGGCCGTCACGCGGCCGGCGAGGATCCGGCCAAGCGCGAACAGATCCTCGACGGGGCCAAACGCATCTTCATGGGAAAGGGTTTCGATGCGGCGAGCATGAATGACGTCGCCCGCGAGGCCGGCGTCTCCAAGGGCACGATCTACGTTTATTTCCAGAACAAGGAAGACCTGTTCGCCGACCTGATCGAGCGCGAGCGCACCCGCTTCGCGCTGTCGACGCGCGATGCGCTGGAAAAACCCGCCGGTGTCGAGGACGCGCTCTTTCATTTCGGCATGACCTTCTGTCAACACATGATGAACGACGACGTCATCTGTTCGATGCGCAGCGTCATCGGCGTCATCGACCGGATGCCGGGGCTGGCGCGGCGCTTCTTTTCCTCCGAATCCGTCAACGTGCGCAGCGTTCTTCGCGACTATCTCGAAATGCAGCGCATGCAGGGAAAGCTCGCGATCGACGACACCGATCTCGCCGCCCGCCAGCTCATCGACATGTGCAGCGGCAGCTATTTCAAGCTCCGCCTGTTTGGCGAAATGAAGAAGCCACCGCCGCGCGAGGAGCTCGACCGCGTGATCGGCAGCGCGGTGCGCGTCTTCATGGCCGCCTACCGCCGCGCCGCCTGA
PROTEIN sequence
Length: 226
MTDTRKQATEAAAPTPPITGRHAAGEDPAKREQILDGAKRIFMGKGFDAASMNDVAREAGVSKGTIYVYFQNKEDLFADLIERERTRFALSTRDALEKPAGVEDALFHFGMTFCQHMMNDDVICSMRSVIGVIDRMPGLARRFFSSESVNVRSVLRDYLEMQRMQGKLAIDDTDLAARQLIDMCSGSYFKLRLFGEMKKPPPREELDRVIGSAVRVFMAAYRRAA*