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SCNpilot_expt_1000_bf_scaffold_1252_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1957..2376)

Top 3 Functional Annotations

Value Algorithm Source
toxin n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036CAB93 similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 130.0
  • Bit_score: 156
  • Evalue 2.50e-35
Putative trifolitoxin related protein {ECO:0000313|EMBL:EPE94907.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 130.0
  • Bit_score: 153
  • Evalue 2.30e-34
TfuA domain protein core similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 139.0
  • Bit_score: 151
  • Evalue 2.00e-34

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGACGACGAGGCGGTGGCACTGGTCCCCGGGCCGGCCGAGATGAACTGGACGCCACTTTCCATTCCCTGGGTGGATTTCCAGCCGACCATGGAAAAGATGCACAGCGAGGGCCATATGACCGCCCGTGAGTGGCAAAGAATGCTGATGACCGGTCGTGTGCTGCACTTTTCCGAGCGCACCTATCCGCGCGTCATCCGCGAATGCGCCTTCGAGAACGAGCAGCGTGGCCGCGCCCTGCTGCAGGCGATTCGCCAAGGCAGGATCGAGCGCAAGCGTGCCGATGCGCTGGCCGTGCTCGATTGGCTGGCGGCAGACACAAGCGTCGCCCAAAGGACGGATTGGAACTTCATGGCCACGTCGCATTGGGAAATGCTGCGCTCCGAAGTCATTGCAAATCGTCTCCAGCCAGCCCTGTAA
PROTEIN sequence
Length: 140
MDDEAVALVPGPAEMNWTPLSIPWVDFQPTMEKMHSEGHMTAREWQRMLMTGRVLHFSERTYPRVIRECAFENEQRGRALLQAIRQGRIERKRADALAVLDWLAADTSVAQRTDWNFMATSHWEMLRSEVIANRLQPAL*