ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1252_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 15280..16818

Top 3 Functional Annotations

Value Algorithm Source
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 511.0
  • Bit_score: 851
  • Evalue 8.50e-244
Histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 511.0
  • Bit_score: 847
  • Evalue 1.60e-243
Histidine ammonia-lyase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LDE4_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 511.0
  • Bit_score: 847
  • Evalue 5.10e-243

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGACCATCATTCTGCATCCGGGCAAGGTTCCGCTTGCCGATCTCGCCCGCGTCTATTGGGACGGCGAAACCGTGCGTCTCGACCGTGGCTGCGATGCCGCCATCGAAAAGGCTGCGGCGCGGATTGCGGCCATCGCCGCCGGCAACGCACCGGTCTATGGCATCAATACCGGCTTCGGCAAGCTCGCCTCGATCCGTATCGACGCCTCCGATGTCGCGACGCTGCAGCGCAATCTCATCCTGTCGCATTGCTGTGGCGTCGGCGCGGCGCTGCCGGTCGAGATTGTTCGCCTCATCATGGCGCTGAAGCTGATTTCACTGGGCCGCGGCGCCTCGGGCGTGCGTTTGGAACTGGTGCGGCTGATCGAGGGCATGCTGGAAACCGGCGTCACCCCGCTCATCCCGGAAAAGGGGTCGGTCGGCGCGTCCGGCGACCTGGCGCCGCTGGCGCACATGACCGCCGTGATGATGGGTGAAGGCGAAGCCTTCTATGCAGGCGAACGCCTTGCCGGCGCCGAAGCGCTGTCGCGCGCGGGCCTGACGCCGATCCGCCTGGCCGCCAAGGAAGGCCTGGCGCTGATCAATGGCACGCAGGCCTCCACCGCGCTGGCGCTGGCCGGCCTGTTCCGCGCCCATCGCGCCGCGCAGTCGGCGCTGGTCACCGGCGCGCTGTCCACCGATGCCGCCATGGGCTCCTCGGCACCCTTCCACCCCGATATCCATACGCTACGCGGCCACAAGGGCCAGATCGACGCCGGCGCTGCGTTGCGCCGCCTGCTCGACGGTTCTGAAATCCGCAACAGTCATATCCAGGGCGACGAGCGCGTGCAGGATCCCTATTGCATCCGCTGCCAGCCGCAGGTCGACGGCGCCTGCCTCGATCTCCTCGCCGCGGTCGCCCGCACGCTGGAAATCGAAGCCAATGCCGTCACCGACAATCCGCTGGTGCTGTCCGATGACGACGTCGTTTCCGGCGGCAACTTCCATGCCGAGCCGGTCGCTTTCGCCGCCGACCAGACGGCGCTCGCCATCTGTGAAATCGGCGCCATCGCCCAGCGCCGCATCGCCCTGCTGGTCGATCCCGCTTTGTCGCATGGCCTGCCGGCCTTTCTGTCGAAGAAGCCGGGCCTGAACTCCGGCCTGATGATCGCCGAAGTCACCTCGGCGGCGCTGATGTCGGAAAACAAGCAGATGTCGCATCCGGCCTCGGTCGACTCCACGCCCACCTCCGCCAACCAGGAAGACCATGTTTCCATGGCCTGCCACGGCGCCCGACGCCAGCTCGCCATGACCGATAACCTGTTCGCCATCCTCGGCATCGAAGCCCTGGCGGCCGCCCAGGGCGTCGAACTGCGCGGCCCGCTCAAGACCAGCCCCGAACTGCAGAAGGCGCTTGCCGCCATCCGCGCCCGCGTGGCCAGCCTCGACGACGACCGCTTCATGGCAAACGACCTCAAGGCGGCCGCCGACCTCGTCGCCACCGGAGCCCTTGCCGCTTCCGTCGATCCATCGATCCTGCCGGTTCTGGAAGCGAAGTAA
PROTEIN sequence
Length: 513
MTIILHPGKVPLADLARVYWDGETVRLDRGCDAAIEKAAARIAAIAAGNAPVYGINTGFGKLASIRIDASDVATLQRNLILSHCCGVGAALPVEIVRLIMALKLISLGRGASGVRLELVRLIEGMLETGVTPLIPEKGSVGASGDLAPLAHMTAVMMGEGEAFYAGERLAGAEALSRAGLTPIRLAAKEGLALINGTQASTALALAGLFRAHRAAQSALVTGALSTDAAMGSSAPFHPDIHTLRGHKGQIDAGAALRRLLDGSEIRNSHIQGDERVQDPYCIRCQPQVDGACLDLLAAVARTLEIEANAVTDNPLVLSDDDVVSGGNFHAEPVAFAADQTALAICEIGAIAQRRIALLVDPALSHGLPAFLSKKPGLNSGLMIAEVTSAALMSENKQMSHPASVDSTPTSANQEDHVSMACHGARRQLAMTDNLFAILGIEALAAAQGVELRGPLKTSPELQKALAAIRARVASLDDDRFMANDLKAAADLVATGALAASVDPSILPVLEAK*